Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475909

Identifier: 113475909

GI number: 113475909

Start: 3535618

End: 3535845

Strand: Reverse

Name: 113475909

Synonym: Tery_2269

Alternate gene names: NA

Gene position: 3535845-3535618 (Counterclockwise)

Preceding gene: 113475910

Following gene: 113475908

Centisome position: 45.62

GC content: 25.0

Gene sequence:

>228_bases
TTGGATTTTGTTTCTAAATATCTTCAAGCAGGAGGTCTGTTAATAATTAGTGCTTTTAATGCTTATGGAGATAATTTAGT
GAAATTGGATAATGGTATTGTTAATAAAAGAATTGCGACTACTGAATTAATTAAAAATGAATGTTATGCTATTCTTGATT
ATTTTTTTTATGAAAATGAGGAGTTATTAGAACAACACACAGTAAAACTTCAATTACTCAATTATTAA

Upstream 100 bases:

>100_bases
TCTCGTGGTGCTGCGTAGACGTTTTTTTTTAAATAGCAATCCCAAATCAGAAACAATGTTGGCTAGCCACATTTTTAGTT
TTTGATATATACAGAAAAGC

Downstream 100 bases:

>100_bases
ACCTATACTATGATTCTAAAAAAGCAGGATTTATAGAAAAAGACATCACACTAGGAAAATCAGGAAAATATTATACCTAC
TTAAAAAATACTTAAAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MDFVSKYLQAGGLLIISAFNAYGDNLVKLDNGIVNKRIATTELIKNECYAILDYFFYENEELLEQHTVKLQLLNY

Sequences:

>Translated_75_residues
MDFVSKYLQAGGLLIISAFNAYGDNLVKLDNGIVNKRIATTELIKNECYAILDYFFYENEELLEQHTVKLQLLNY
>Mature_75_residues
MDFVSKYLQAGGLLIISAFNAYGDNLVKLDNGIVNKRIATTELIKNECYAILDYFFYENEELLEQHTVKLQLLNY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8667; Mature: 8667

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFVSKYLQAGGLLIISAFNAYGDNLVKLDNGIVNKRIATTELIKNECYAILDYFFYENE
CCHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH
ELLEQHTVKLQLLNY
HHHHHHHHHEEEECC
>Mature Secondary Structure
MDFVSKYLQAGGLLIISAFNAYGDNLVKLDNGIVNKRIATTELIKNECYAILDYFFYENE
CCHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH
ELLEQHTVKLQLLNY
HHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA