The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475871

Identifier: 113475871

GI number: 113475871

Start: 3478796

End: 3480319

Strand: Reverse

Name: 113475871

Synonym: Tery_2230

Alternate gene names: NA

Gene position: 3480319-3478796 (Counterclockwise)

Preceding gene: 113475872

Following gene: 113475870

Centisome position: 44.91

GC content: 26.31

Gene sequence:

>1524_bases
ATGAAATTTACTGATAAGCAAAGAATCAAATTTCGTGAAGAGATTGAAAAGGTATTAAGTGAGGATAAACTGACAAGTAT
ATTTTCTGAATATCCAGAGAAATTTGGAGCTAATTTTTATAATAAAATTAAAGGAGATACCTATCATACAAGGTTGATTA
ATTTAATCATTGAGCTAAATAATACAGAACTTATTGTTGATTTTGTTAAAATTGTTAGTGAGGACTATCCATTAATTGAA
GAACTTTACCAAACATATTCACAACTTTCTACTCTTATTTTTTTACTAAAAAAAATTTTTTCAGAAAACCAAAATTTTGG
GATTTTTTTTGGGGACTTTGAAAATATAGATAAATTAGAAGAGCATTTATTAGAGTTAACTGAAGAAACTGAAAAAACTG
AAAAAAATGGTAATGGTTTGCTTTTTAGTGATAGAGATAGTTTTTATTTTTACTATGATCCAAAGTTCATAGATTTTGTA
GAACAATATTTAGTTAAAATTTTGAATGCTGAAGATATTAGAGATTATCTCAAGCAAAGATTGAGAAAATGGATAGAAAC
AAATTGCTCAGATATAAATATTCCTGATAAAAAAGACAAACCATCTGATCTCCAAAGCTATCTTTTGATAACTATTTTTC
CTATGGGAAGTCAGATTAAAAATCATAAAAAAACATTTAATGTTCAAGGTGAGTTTATTGAAAACTGGGGTCATACTAAA
AATATTCAAGTTGAGCTGAAGAAAGAAGATTTTGAGGAAAATGGATATTCAGAAAAGCAAATTCCTAATATTATTTATAA
ATTCATTGAGCAGGTTCAAGAGGTATATTTGCGTAAACTAGTGCAACAAAATAAAACTTATGATTTAAAACTTGAGCTAT
TTTTAAAGAGAGAACTTTTTATTAAAGATTTTGAGTTTAAAATTCCTAGTGCTTTAAAAGCAAAACAAAAAGCTATTTGT
GAAGAATATCCTGTAATTTTACGCTCTTTAGAACGATTACAACCAGGTAAAACTAGTTGGCTAAACTGTTGCAAAAAAAA
CTGGAAAATTATGGAGAAAAAACCAGTTATATCAAATAATATTTTAGCTTTTGAAGTGGAAGATAAATTAAATGAATTCT
TGTCTAACCCACAAAAAAGAAAACAGCTAGGAAATAAATTAGAGGATAAAATTATCCTGAAAATATCCTGTGGTTTACCT
AAAGGAAATAATAAAGCATTTAATTTATTTGAAGTTATTTTAGAAAAGGGAGTTCCTTTATGTCTATGGATAAAAAGGAA
AAATCAAAGGGATAATTTAAATGATTCCCATTATCAATCTTTAATAGATAAGCTCAATCATTTAATAGAATTAGAAAATT
TGTCAGATGTTAATCAATTATATACACAAATTTTTGATATTCGTAAAACAGACCTGGCTATTGCTGATAGTTCTAAAACA
GAATCTTTAGGTTACCATTTAAGAATTTTATGTGATTGTAATGACCGCAAACCAATCAACATTCCTGCTTTTAATCAATT
TTAA

Upstream 100 bases:

>100_bases
AACTTATTTTTGATTTTATTAAAGTTGTTAGGTATGAGTATCATAATTTTGCTCAAGATTTATAAATAGTAGATAAAATA
GTAATGTAAGTACATTGCAA

Downstream 100 bases:

>100_bases
TCAACTAAATAATTAGTTCTTAAAAAAGGAGAAAGCAGTGGTAAAAATTTATCCCCAAAATAATATGATGGAAAATCAAC
AAGCCTGGCTTTTTTTCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MKFTDKQRIKFREEIEKVLSEDKLTSIFSEYPEKFGANFYNKIKGDTYHTRLINLIIELNNTELIVDFVKIVSEDYPLIE
ELYQTYSQLSTLIFLLKKIFSENQNFGIFFGDFENIDKLEEHLLELTEETEKTEKNGNGLLFSDRDSFYFYYDPKFIDFV
EQYLVKILNAEDIRDYLKQRLRKWIETNCSDINIPDKKDKPSDLQSYLLITIFPMGSQIKNHKKTFNVQGEFIENWGHTK
NIQVELKKEDFEENGYSEKQIPNIIYKFIEQVQEVYLRKLVQQNKTYDLKLELFLKRELFIKDFEFKIPSALKAKQKAIC
EEYPVILRSLERLQPGKTSWLNCCKKNWKIMEKKPVISNNILAFEVEDKLNEFLSNPQKRKQLGNKLEDKIILKISCGLP
KGNNKAFNLFEVILEKGVPLCLWIKRKNQRDNLNDSHYQSLIDKLNHLIELENLSDVNQLYTQIFDIRKTDLAIADSSKT
ESLGYHLRILCDCNDRKPINIPAFNQF

Sequences:

>Translated_507_residues
MKFTDKQRIKFREEIEKVLSEDKLTSIFSEYPEKFGANFYNKIKGDTYHTRLINLIIELNNTELIVDFVKIVSEDYPLIE
ELYQTYSQLSTLIFLLKKIFSENQNFGIFFGDFENIDKLEEHLLELTEETEKTEKNGNGLLFSDRDSFYFYYDPKFIDFV
EQYLVKILNAEDIRDYLKQRLRKWIETNCSDINIPDKKDKPSDLQSYLLITIFPMGSQIKNHKKTFNVQGEFIENWGHTK
NIQVELKKEDFEENGYSEKQIPNIIYKFIEQVQEVYLRKLVQQNKTYDLKLELFLKRELFIKDFEFKIPSALKAKQKAIC
EEYPVILRSLERLQPGKTSWLNCCKKNWKIMEKKPVISNNILAFEVEDKLNEFLSNPQKRKQLGNKLEDKIILKISCGLP
KGNNKAFNLFEVILEKGVPLCLWIKRKNQRDNLNDSHYQSLIDKLNHLIELENLSDVNQLYTQIFDIRKTDLAIADSSKT
ESLGYHLRILCDCNDRKPINIPAFNQF
>Mature_507_residues
MKFTDKQRIKFREEIEKVLSEDKLTSIFSEYPEKFGANFYNKIKGDTYHTRLINLIIELNNTELIVDFVKIVSEDYPLIE
ELYQTYSQLSTLIFLLKKIFSENQNFGIFFGDFENIDKLEEHLLELTEETEKTEKNGNGLLFSDRDSFYFYYDPKFIDFV
EQYLVKILNAEDIRDYLKQRLRKWIETNCSDINIPDKKDKPSDLQSYLLITIFPMGSQIKNHKKTFNVQGEFIENWGHTK
NIQVELKKEDFEENGYSEKQIPNIIYKFIEQVQEVYLRKLVQQNKTYDLKLELFLKRELFIKDFEFKIPSALKAKQKAIC
EEYPVILRSLERLQPGKTSWLNCCKKNWKIMEKKPVISNNILAFEVEDKLNEFLSNPQKRKQLGNKLEDKIILKISCGLP
KGNNKAFNLFEVILEKGVPLCLWIKRKNQRDNLNDSHYQSLIDKLNHLIELENLSDVNQLYTQIFDIRKTDLAIADSSKT
ESLGYHLRILCDCNDRKPINIPAFNQF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60139; Mature: 60139

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFTDKQRIKFREEIEKVLSEDKLTSIFSEYPEKFGANFYNKIKGDTYHTRLINLIIELN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHEEEC
NTELIVDFVKIVSEDYPLIEELYQTYSQLSTLIFLLKKIFSENQNFGIFFGDFENIDKLE
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHH
EHLLELTEETEKTEKNGNGLLFSDRDSFYFYYDPKFIDFVEQYLVKILNAEDIRDYLKQR
HHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHCHHHHHHHHHHH
LRKWIETNCSDINIPDKKDKPSDLQSYLLITIFPMGSQIKNHKKTFNVQGEFIENWGHTK
HHHHHHCCCCCCCCCCCCCCCHHHHHEEEHEEECCCHHHHCCCCEECCCHHHHHCCCCCC
NIQVELKKEDFEENGYSEKQIPNIIYKFIEQVQEVYLRKLVQQNKTYDLKLELFLKRELF
CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHH
IKDFEFKIPSALKAKQKAICEEYPVILRSLERLQPGKTSWLNCCKKNWKIMEKKPVISNN
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEECCCCCCCCC
ILAFEVEDKLNEFLSNPQKRKQLGNKLEDKIILKISCGLPKGNNKAFNLFEVILEKGVPL
EEEEEEHHHHHHHHCCHHHHHHHCCHHCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCE
CLWIKRKNQRDNLNDSHYQSLIDKLNHLIELENLSDVNQLYTQIFDIRKTDLAIADSSKT
EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCEEEECCCCC
ESLGYHLRILCDCNDRKPINIPAFNQF
CCCCEEEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MKFTDKQRIKFREEIEKVLSEDKLTSIFSEYPEKFGANFYNKIKGDTYHTRLINLIIELN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHEEEC
NTELIVDFVKIVSEDYPLIEELYQTYSQLSTLIFLLKKIFSENQNFGIFFGDFENIDKLE
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHH
EHLLELTEETEKTEKNGNGLLFSDRDSFYFYYDPKFIDFVEQYLVKILNAEDIRDYLKQR
HHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHCHHHHHHHHHHH
LRKWIETNCSDINIPDKKDKPSDLQSYLLITIFPMGSQIKNHKKTFNVQGEFIENWGHTK
HHHHHHCCCCCCCCCCCCCCCHHHHHEEEHEEECCCHHHHCCCCEECCCHHHHHCCCCCC
NIQVELKKEDFEENGYSEKQIPNIIYKFIEQVQEVYLRKLVQQNKTYDLKLELFLKRELF
CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHH
IKDFEFKIPSALKAKQKAICEEYPVILRSLERLQPGKTSWLNCCKKNWKIMEKKPVISNN
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEECCCCCCCCC
ILAFEVEDKLNEFLSNPQKRKQLGNKLEDKIILKISCGLPKGNNKAFNLFEVILEKGVPL
EEEEEEHHHHHHHHCCHHHHHHHCCHHCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCE
CLWIKRKNQRDNLNDSHYQSLIDKLNHLIELENLSDVNQLYTQIFDIRKTDLAIADSSKT
EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCEEEECCCCC
ESLGYHLRILCDCNDRKPINIPAFNQF
CCCCEEEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA