Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475870

Identifier: 113475870

GI number: 113475870

Start: 3477613

End: 3478758

Strand: Reverse

Name: 113475870

Synonym: Tery_2229

Alternate gene names: NA

Gene position: 3478758-3477613 (Counterclockwise)

Preceding gene: 113475871

Following gene: 113475869

Centisome position: 44.89

GC content: 38.31

Gene sequence:

>1146_bases
GTGGTAAAAATTTATCCCCAAAATAATATGATGGAAAATCAACAAGCCTGGCTTTTTTTCTATGGTGATGGAAATACACA
TAATGTTAATATTGCTGACCTTCCTGATCCTCCCCCTTGGCGAAAATTTCAAGAGATAGAAAAAGATTCTGAATTAAAAA
AACAACTGGAAAAAGATTGGCAAAATATTCAAATTTTAGCTGAGTCTGATGATAATAAAAGGGGTAGAGAAAAGGGTGAA
AAATTTCGTGTTTATTCCTCAGAAATAACTGAGGAAGATGATGGTCAAAAACCACTTGTTAATGTTGTTGATGCCGTAAA
TGCTGCAATATATTTACGACGGCCTCTTTTGGTCACAGGAAACCCTGGTTCGGGTAAAACTTCCTTGGCTTATGCGATCG
CACAGGAATTAAAATTAGGGCCCGTATTGAATTGGCCCATTACAGCTCGTTCTAATTTGGTCGATGGACTTTATCGTTAT
GATGCGATCGCTCGGTTACAAGATTCTCAGTTAAATAGGGAGAACTTACAAAATATTGGCCAATATGTCACTTTGGGCCC
GGTAGGAACAGCTTTTTTACCTTCTTTATATCCGAGAGTATTATTAATTGATGAGATAGATAAAAGTGATATTAATTTGC
CGAATGATTTGCTTCACTTATTTGAGGAGGGAAGGTTTGAAATTCCTGAGTTGGTCCGTTGGGCTGATAGGTCTGAAAAA
AGTTCTGAAAATGATCAACCAACAAAAGTAAAAGTGCGGACGGAAGATGCGGGTATCAAAGCTTCTATTATAGGGGGAAG
AGTTCATTGTTCTAGTTTTCCTATTGTAATTATGACTAGTAATGGGGAACGGGACTTTCCTCCGGCTTTTGTGCGCCGCT
GTCTCCGAATAAGAATGCCAGACCCGGGTGCGGCAGCTCTTCAAACTATTATTAAGGCTCATTTTCAGGATGAGGAACAA
GGTGAAAGTTTGAAGACAACAACTGAGGAACTTATTGAAGCTTTTTTGGAAAAGGACGAACAGGAACGGGCAACGGATCA
GTTATTGAATGCTATTTATATTCGCAATAACCTTAGTCCAGAAGCTTTTACTGATGACTTACAAGCTTTATTATTGAAGG
GTTTATCAACTACGGATGAATTTTGA

Upstream 100 bases:

>100_bases
AGAATTTTATGTGATTGTAATGACCGCAAACCAATCAACATTCCTGCTTTTAATCAATTTTAATCAACTAAATAATTAGT
TCTTAAAAAAGGAGAAAGCA

Downstream 100 bases:

>100_bases
TAACAATGTCAATAGTAATGTAGGTTGGGCAGAACGACACTGAAGTCAAACATCAGGATAATTTTGGTAATGTTGAGTGT
ATTTTATTGATATAATTTAG

Product: ATPase

Products: NA

Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; ATPase Central Domain-Containing Protein; AAA ATPase; MoxR-Like ATPase; ATPase AAA Family Protein; AAA Family ATPase; ATPase-Like Protein; AAA_5 ATPase; ATPase Associated With Various Cellular Activities; AAA ATPase Central RegionATPase; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; ClpA/ClpB Family Protein; ATPase Aaa Family; AAA ATPase Family Protein; ATPase Protein

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MVKIYPQNNMMENQQAWLFFYGDGNTHNVNIADLPDPPPWRKFQEIEKDSELKKQLEKDWQNIQILAESDDNKRGREKGE
KFRVYSSEITEEDDGQKPLVNVVDAVNAAIYLRRPLLVTGNPGSGKTSLAYAIAQELKLGPVLNWPITARSNLVDGLYRY
DAIARLQDSQLNRENLQNIGQYVTLGPVGTAFLPSLYPRVLLIDEIDKSDINLPNDLLHLFEEGRFEIPELVRWADRSEK
SSENDQPTKVKVRTEDAGIKASIIGGRVHCSSFPIVIMTSNGERDFPPAFVRRCLRIRMPDPGAAALQTIIKAHFQDEEQ
GESLKTTTEELIEAFLEKDEQERATDQLLNAIYIRNNLSPEAFTDDLQALLLKGLSTTDEF

Sequences:

>Translated_381_residues
MVKIYPQNNMMENQQAWLFFYGDGNTHNVNIADLPDPPPWRKFQEIEKDSELKKQLEKDWQNIQILAESDDNKRGREKGE
KFRVYSSEITEEDDGQKPLVNVVDAVNAAIYLRRPLLVTGNPGSGKTSLAYAIAQELKLGPVLNWPITARSNLVDGLYRY
DAIARLQDSQLNRENLQNIGQYVTLGPVGTAFLPSLYPRVLLIDEIDKSDINLPNDLLHLFEEGRFEIPELVRWADRSEK
SSENDQPTKVKVRTEDAGIKASIIGGRVHCSSFPIVIMTSNGERDFPPAFVRRCLRIRMPDPGAAALQTIIKAHFQDEEQ
GESLKTTTEELIEAFLEKDEQERATDQLLNAIYIRNNLSPEAFTDDLQALLLKGLSTTDEF
>Mature_381_residues
MVKIYPQNNMMENQQAWLFFYGDGNTHNVNIADLPDPPPWRKFQEIEKDSELKKQLEKDWQNIQILAESDDNKRGREKGE
KFRVYSSEITEEDDGQKPLVNVVDAVNAAIYLRRPLLVTGNPGSGKTSLAYAIAQELKLGPVLNWPITARSNLVDGLYRY
DAIARLQDSQLNRENLQNIGQYVTLGPVGTAFLPSLYPRVLLIDEIDKSDINLPNDLLHLFEEGRFEIPELVRWADRSEK
SSENDQPTKVKVRTEDAGIKASIIGGRVHCSSFPIVIMTSNGERDFPPAFVRRCLRIRMPDPGAAALQTIIKAHFQDEEQ
GESLKTTTEELIEAFLEKDEQERATDQLLNAIYIRNNLSPEAFTDDLQALLLKGLSTTDEF

Specific function: Unknown

COG id: COG0714

COG function: function code R; MoxR-like ATPases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43216; Mature: 43216

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKIYPQNNMMENQQAWLFFYGDGNTHNVNIADLPDPPPWRKFQEIEKDSELKKQLEKDW
CEEECCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC
QNIQILAESDDNKRGREKGEKFRVYSSEITEEDDGQKPLVNVVDAVNAAIYLRRPLLVTG
CCEEEEEECCCCCCHHHCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHHEEEECCEEEEC
NPGSGKTSLAYAIAQELKLGPVLNWPITARSNLVDGLYRYDAIARLQDSQLNRENLQNIG
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QYVTLGPVGTAFLPSLYPRVLLIDEIDKSDINLPNDLLHLFEEGRFEIPELVRWADRSEK
CEEEECCCHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCC
SSENDQPTKVKVRTEDAGIKASIIGGRVHCSSFPIVIMTSNGERDFPPAFVRRCLRIRMP
CCCCCCCCEEEEEECCCCEEEEEECCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHCCC
DPGAAALQTIIKAHFQDEEQGESLKTTTEELIEAFLEKDEQERATDQLLNAIYIRNNLSP
CCCHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCH
EAFTDDLQALLLKGLSTTDEF
HHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVKIYPQNNMMENQQAWLFFYGDGNTHNVNIADLPDPPPWRKFQEIEKDSELKKQLEKDW
CEEECCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC
QNIQILAESDDNKRGREKGEKFRVYSSEITEEDDGQKPLVNVVDAVNAAIYLRRPLLVTG
CCEEEEEECCCCCCHHHCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHHEEEECCEEEEC
NPGSGKTSLAYAIAQELKLGPVLNWPITARSNLVDGLYRYDAIARLQDSQLNRENLQNIG
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QYVTLGPVGTAFLPSLYPRVLLIDEIDKSDINLPNDLLHLFEEGRFEIPELVRWADRSEK
CEEEECCCHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCC
SSENDQPTKVKVRTEDAGIKASIIGGRVHCSSFPIVIMTSNGERDFPPAFVRRCLRIRMP
CCCCCCCCEEEEEECCCCEEEEEECCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHCCC
DPGAAALQTIIKAHFQDEEQGESLKTTTEELIEAFLEKDEQERATDQLLNAIYIRNNLSP
CCCHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCH
EAFTDDLQALLLKGLSTTDEF
HHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA