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The map label for this gene is atpA

Identifier: 113475840

GI number: 113475840

Start: 3430009

End: 3431526

Strand: Reverse

Name: atpA

Synonym: Tery_2199

Alternate gene names: 113475840

Gene position: 3431526-3430009 (Counterclockwise)

Preceding gene: 113475841

Following gene: 113475839

Centisome position: 44.28

GC content: 41.9

Gene sequence:

>1518_bases
ATGGTATCAATTAGACCTGACGAAATTAGCCAAATTATTCGCGACCAGATAGAACAGTATGAGCAAGATGTAAAAGTATC
TAATGTTGGTACTGTTCTTCAAGTAGGTGATGGTATTGCCCGTGTTTATGGGTTAGACAAAGTAATGGCTGGAGAACTGG
TAGAGTTCGCAGATGGTACTGTAGGTATTGCCCAAAACCTAGAAGAGGATAATGTAGGTGCAGTATTAATGGGTGAAGGC
AGAGAAATCCAAGAAGGCTCTGCTGTAACCGCTACAGGTAGAATTGCCCAGGTGCCAGTAGGAGACGCGTTGGTTGGCCG
GGTGGTTGATGGCCTTGGTCGTCCAATTGACGGTAAAGGAGAGATGAAAACTACTGATAGTCGTCTACTGGAATCACCAG
CTCCAGGAATTATCGATCGCCGTTCTGTTTATGAACCTATGCAAACAGGTATTACTGCGATTGATTCTATGATTCCTATT
GGTAGGGGTCAACGAGAACTGATTATCGGTGATAGACAAACAGGTAAAACAGCGATCGCCATTGATACTATTATTAACCA
AAAAGGTGAAGATGTTATCTGTGTATATGTAGCTATTGGTCAAAAAGCTTCTACAGTAGCTCAGGTAGTAGGTACTCTAG
AAGAAAAAGGCGCACTAGATTATACGGTGATAGTAGCAGCTAACGCTAGTGATCCAGCAACTCTACAATATTTAGCTCCT
TATACTGGTGCTACTATTGCCGAATACTTCATGTACAAAGGCAAAGCAACTTTGGTAATCTACGATGACCTTTCCAAGCA
AGCTCAAGCTTATCGTCAGGTATCTTTGCTATTACGTCGCCCACCAGGTCGGGAAGCATATCCAGGAGATGTGTTTTATC
TCCACTCCCGTCTTCTAGAAAGAGCTGCTAAACTCAATGACAAACTTGGTGGAGGTAGTATGACTGCTCTACCAATTATT
GAAACTCAAGCAGGTGACGTTTCAGCTTACATCCCTACTAACGTAATTTCCATTACTGATGGTCAAATATTCCTGTCTAG
TGACTTATTTAATGCAGGTTTCCGGCCGGCGGTGAATGCTGGTATTTCTGTATCTAGGGTTGGTTCTGCGGCTCAAACTA
AAGCTATCAAAAAAGTTGCTGGTAAAATTAAGTTAGAGCTAGCTCAGTTTGCTGAATTAGAAGCATTCTCCCAGTTTGCT
TCTGACCTGGATAAGGCTACTCAAAACCAACTGGCACGGGGTCAGCGTTTGCGGGAGATTTTGAAGCAACCTCAAAATTC
ACCTAGGTCACTTCCTGAGCAGGTAGCAGCAATTTATTCTGGTATTAATGGTTACTTAGATGATATTCCTCTGGAAAAAG
CGGCTAAGTTTATTGCTGGTTTACTAGATTACTTAAACAATAGTAAGCCTAAGTTTGGTGAAATCATTAAAACAGAAAAG
GTACTTACTGATGAAGCACAAACTCTCTTAAAAGAGGGGATCACTGAGTATAAGCAGACATTCTTGGTATCAGCTTAG

Upstream 100 bases:

>100_bases
TGACTATATTTCAGAGGAGTAAGAATGTCCGAACTGCCCTGGCAACTGCTATATAATACCCGATAATTTTTTGTAAAAAG
CTTGACAAAATAAAAATAAA

Downstream 100 bases:

>100_bases
TATGTTGCTTTGAGATATCAAGGGTTAGTGGTTAGTTGTTAATGATCAAGAACAATTAGCCACTAATCATTAATGGACTT
ATGGACCTAAACAAGCAACC

Product: F0F1 ATP synthase subunit alpha

Products: NA

Alternate protein names: ATP synthase F1 sector subunit alpha; F-ATPase subunit alpha

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MVSIRPDEISQIIRDQIEQYEQDVKVSNVGTVLQVGDGIARVYGLDKVMAGELVEFADGTVGIAQNLEEDNVGAVLMGEG
REIQEGSAVTATGRIAQVPVGDALVGRVVDGLGRPIDGKGEMKTTDSRLLESPAPGIIDRRSVYEPMQTGITAIDSMIPI
GRGQRELIIGDRQTGKTAIAIDTIINQKGEDVICVYVAIGQKASTVAQVVGTLEEKGALDYTVIVAANASDPATLQYLAP
YTGATIAEYFMYKGKATLVIYDDLSKQAQAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDKLGGGSMTALPII
ETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGFRPAVNAGISVSRVGSAAQTKAIKKVAGKIKLELAQFAELEAFSQFA
SDLDKATQNQLARGQRLREILKQPQNSPRSLPEQVAAIYSGINGYLDDIPLEKAAKFIAGLLDYLNNSKPKFGEIIKTEK
VLTDEAQTLLKEGITEYKQTFLVSA

Sequences:

>Translated_505_residues
MVSIRPDEISQIIRDQIEQYEQDVKVSNVGTVLQVGDGIARVYGLDKVMAGELVEFADGTVGIAQNLEEDNVGAVLMGEG
REIQEGSAVTATGRIAQVPVGDALVGRVVDGLGRPIDGKGEMKTTDSRLLESPAPGIIDRRSVYEPMQTGITAIDSMIPI
GRGQRELIIGDRQTGKTAIAIDTIINQKGEDVICVYVAIGQKASTVAQVVGTLEEKGALDYTVIVAANASDPATLQYLAP
YTGATIAEYFMYKGKATLVIYDDLSKQAQAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDKLGGGSMTALPII
ETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGFRPAVNAGISVSRVGSAAQTKAIKKVAGKIKLELAQFAELEAFSQFA
SDLDKATQNQLARGQRLREILKQPQNSPRSLPEQVAAIYSGINGYLDDIPLEKAAKFIAGLLDYLNNSKPKFGEIIKTEK
VLTDEAQTLLKEGITEYKQTFLVSA
>Mature_505_residues
MVSIRPDEISQIIRDQIEQYEQDVKVSNVGTVLQVGDGIARVYGLDKVMAGELVEFADGTVGIAQNLEEDNVGAVLMGEG
REIQEGSAVTATGRIAQVPVGDALVGRVVDGLGRPIDGKGEMKTTDSRLLESPAPGIIDRRSVYEPMQTGITAIDSMIPI
GRGQRELIIGDRQTGKTAIAIDTIINQKGEDVICVYVAIGQKASTVAQVVGTLEEKGALDYTVIVAANASDPATLQYLAP
YTGATIAEYFMYKGKATLVIYDDLSKQAQAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDKLGGGSMTALPII
ETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGFRPAVNAGISVSRVGSAAQTKAIKKVAGKIKLELAQFAELEAFSQFA
SDLDKATQNQLARGQRLREILKQPQNSPRSLPEQVAAIYSGINGYLDDIPLEKAAKFIAGLLDYLNNSKPKFGEIIKTEK
VLTDEAQTLLKEGITEYKQTFLVSA

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit

COG id: COG0056

COG function: function code C; F0F1-type ATP synthase, alpha subunit

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family

Homologues:

Organism=Homo sapiens, GI50345984, Length=502, Percent_Identity=59.7609561752988, Blast_Score=585, Evalue=1e-167,
Organism=Homo sapiens, GI4757810, Length=502, Percent_Identity=59.7609561752988, Blast_Score=585, Evalue=1e-167,
Organism=Homo sapiens, GI19913428, Length=301, Percent_Identity=30.5647840531561, Blast_Score=124, Evalue=3e-28,
Organism=Homo sapiens, GI19913426, Length=460, Percent_Identity=26.7391304347826, Blast_Score=121, Evalue=2e-27,
Organism=Homo sapiens, GI32189394, Length=423, Percent_Identity=25.531914893617, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI19913424, Length=240, Percent_Identity=28.75, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI1790172, Length=504, Percent_Identity=56.3492063492063, Blast_Score=551, Evalue=1e-158,
Organism=Escherichia coli, GI1788251, Length=360, Percent_Identity=28.6111111111111, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1790170, Length=397, Percent_Identity=24.6851385390428, Blast_Score=98, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71988063, Length=502, Percent_Identity=59.3625498007968, Blast_Score=588, Evalue=1e-168,
Organism=Caenorhabditis elegans, GI71988080, Length=502, Percent_Identity=59.3625498007968, Blast_Score=587, Evalue=1e-168,
Organism=Caenorhabditis elegans, GI71988074, Length=502, Percent_Identity=55.5776892430279, Blast_Score=537, Evalue=1e-153,
Organism=Caenorhabditis elegans, GI17510931, Length=371, Percent_Identity=28.0323450134771, Blast_Score=123, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17570191, Length=294, Percent_Identity=30.2721088435374, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI25144756, Length=425, Percent_Identity=23.0588235294118, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71988068, Length=81, Percent_Identity=43.2098765432099, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17565854, Length=254, Percent_Identity=27.5590551181102, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17509265, Length=50, Percent_Identity=56, Blast_Score=68, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6319370, Length=505, Percent_Identity=57.8217821782178, Blast_Score=580, Evalue=1e-166,
Organism=Saccharomyces cerevisiae, GI6319603, Length=331, Percent_Identity=31.1178247734139, Blast_Score=129, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6322581, Length=422, Percent_Identity=25.5924170616114, Blast_Score=108, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24658560, Length=505, Percent_Identity=59.4059405940594, Blast_Score=587, Evalue=1e-168,
Organism=Drosophila melanogaster, GI281361666, Length=340, Percent_Identity=29.4117647058824, Blast_Score=130, Evalue=3e-30,
Organism=Drosophila melanogaster, GI24646341, Length=340, Percent_Identity=29.4117647058824, Blast_Score=130, Evalue=3e-30,
Organism=Drosophila melanogaster, GI17136796, Length=340, Percent_Identity=29.4117647058824, Blast_Score=130, Evalue=3e-30,
Organism=Drosophila melanogaster, GI24638766, Length=443, Percent_Identity=25.0564334085779, Blast_Score=106, Evalue=5e-23,
Organism=Drosophila melanogaster, GI28574560, Length=414, Percent_Identity=26.5700483091787, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24583988, Length=251, Percent_Identity=27.0916334661355, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24583986, Length=251, Percent_Identity=27.0916334661355, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24583984, Length=251, Percent_Identity=27.0916334661355, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24583992, Length=251, Percent_Identity=27.0916334661355, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI20129479, Length=248, Percent_Identity=28.6290322580645, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: 9,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): ATPA_TRIEI (Q112Z6)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_721901.1
- ProteinModelPortal:   Q112Z6
- SMR:   Q112Z6
- STRING:   Q112Z6
- GeneID:   4243232
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_2199
- NMPDR:   fig|203124.1.peg.1394
- eggNOG:   COG0056
- HOGENOM:   HBG565875
- OMA:   GSDRDIK
- PhylomeDB:   Q112Z6
- ProtClustDB:   PRK09281
- BioCyc:   TERY203124:TERY_2199-MONOMER
- HAMAP:   MF_01346
- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR005294
- InterPro:   IPR017458
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100
- PANTHER:   PTHR15184:SF3
- TIGRFAMs:   TIGR00962

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N; SSF47917 ATPase_a/b_C; SSF50615 ATPase_a/b_N

EC number: =3.6.3.14

Molecular weight: Translated: 54360; Mature: 54360

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSIRPDEISQIIRDQIEQYEQDVKVSNVGTVLQVGDGIARVYGLDKVMAGELVEFADGT
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
VGIAQNLEEDNVGAVLMGEGREIQEGSAVTATGRIAQVPVGDALVGRVVDGLGRPIDGKG
CHHHCCCCCCCCCEEEECCCCCCCCCCEEEECCCEEECCCCHHHHHHHHHHHCCCCCCCC
EMKTTDSRLLESPAPGIIDRRSVYEPMQTGITAIDSMIPIGRGQRELIIGDRQTGKTAIA
CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEE
IDTIINQKGEDVICVYVAIGQKASTVAQVVGTLEEKGALDYTVIVAANASDPATLQYLAP
EEHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEECC
YTGATIAEYFMYKGKATLVIYDDLSKQAQAYRQVSLLLRRPPGREAYPGDVFYLHSRLLE
CCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
RAAKLNDKLGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGFRPAVNA
HHHHHHCCCCCCCEEEEEEEECCCCCEEEECCCCEEEEECCCEEEECCHHCCCCCCHHHC
GISVSRVGSAAQTKAIKKVAGKIKLELAQFAELEAFSQFASDLDKATQNQLARGQRLREI
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKQPQNSPRSLPEQVAAIYSGINGYLDDIPLEKAAKFIAGLLDYLNNSKPKFGEIIKTEK
HHCCCCCCCHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VLTDEAQTLLKEGITEYKQTFLVSA
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVSIRPDEISQIIRDQIEQYEQDVKVSNVGTVLQVGDGIARVYGLDKVMAGELVEFADGT
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
VGIAQNLEEDNVGAVLMGEGREIQEGSAVTATGRIAQVPVGDALVGRVVDGLGRPIDGKG
CHHHCCCCCCCCCEEEECCCCCCCCCCEEEECCCEEECCCCHHHHHHHHHHHCCCCCCCC
EMKTTDSRLLESPAPGIIDRRSVYEPMQTGITAIDSMIPIGRGQRELIIGDRQTGKTAIA
CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEE
IDTIINQKGEDVICVYVAIGQKASTVAQVVGTLEEKGALDYTVIVAANASDPATLQYLAP
EEHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEECC
YTGATIAEYFMYKGKATLVIYDDLSKQAQAYRQVSLLLRRPPGREAYPGDVFYLHSRLLE
CCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
RAAKLNDKLGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGFRPAVNA
HHHHHHCCCCCCCEEEEEEEECCCCCEEEECCCCEEEEECCCEEEECCHHCCCCCCHHHC
GISVSRVGSAAQTKAIKKVAGKIKLELAQFAELEAFSQFASDLDKATQNQLARGQRLREI
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKQPQNSPRSLPEQVAAIYSGINGYLDDIPLEKAAKFIAGLLDYLNNSKPKFGEIIKTEK
HHCCCCCCCHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VLTDEAQTLLKEGITEYKQTFLVSA
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA