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The map label for this gene is cytM [H]

Identifier: 113475786

GI number: 113475786

Start: 3344106

End: 3344369

Strand: Reverse

Name: cytM [H]

Synonym: Tery_2140

Alternate gene names: 113475786

Gene position: 3344369-3344106 (Counterclockwise)

Preceding gene: 113475788

Following gene: 113475785

Centisome position: 43.15

GC content: 38.26

Gene sequence:

>264_bases
GTGTCTGATCCTTATAGCAAAGATGTATTGTCTCTTGAGGCAGACCCCATAAAAGGTGAAGATATTTTTCAGATCAATTG
TGCAGGTTGTCACAAATCATCTATGGATAGTCAGGTTGGACCAAGGTTAGAGGGAGTATCCCAACATAAGTCGGACTTGG
CAATTATTAAACAAGTAGTTAGTGGCCAAACACCACCTATGCCGCAATTTCAACCTAGTGAGCAAGAAATGGCCGATTTA
TTAAGCTATTTAAAAAAAATATAA

Upstream 100 bases:

>100_bases
TGAAATCAAAAAAGAAGTCCCGCTGCAGTGGATCAGCTTAGTTGGTTCTGCTGTTCTTCTAGTAATCTTATTTATATTTC
TAGGAGTTGAGCCATCTCAA

Downstream 100 bases:

>100_bases
TTAAAAATGAAATAGGGGTTGCCAAAATAGCTCTACTTTTGCTATATTAAAAAACGTTGCCGGTGTAGCTCAGTTGGTAG
AGCACTCGACTTGTAATCGA

Product: cytochrome c, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MSDPYSKDVLSLEADPIKGEDIFQINCAGCHKSSMDSQVGPRLEGVSQHKSDLAIIKQVVSGQTPPMPQFQPSEQEMADL
LSYLKKI

Sequences:

>Translated_87_residues
MSDPYSKDVLSLEADPIKGEDIFQINCAGCHKSSMDSQVGPRLEGVSQHKSDLAIIKQVVSGQTPPMPQFQPSEQEMADL
LSYLKKI
>Mature_86_residues
SDPYSKDVLSLEADPIKGEDIFQINCAGCHKSSMDSQVGPRLEGVSQHKSDLAIIKQVVSGQTPPMPQFQPSEQEMADLL
SYLKKI

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 9563; Mature: 9432

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPYSKDVLSLEADPIKGEDIFQINCAGCHKSSMDSQVGPRLEGVSQHKSDLAIIKQVV
CCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
SGQTPPMPQFQPSEQEMADLLSYLKKI
CCCCCCCCCCCCCHHHHHHHHHHHHHC
>Mature Secondary Structure 
SDPYSKDVLSLEADPIKGEDIFQINCAGCHKSSMDSQVGPRLEGVSQHKSDLAIIKQVV
CCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
SGQTPPMPQFQPSEQEMADLLSYLKKI
CCCCCCCCCCCCCHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]