| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475773
Identifier: 113475773
GI number: 113475773
Start: 3323299
End: 3323946
Strand: Reverse
Name: 113475773
Synonym: Tery_2127
Alternate gene names: NA
Gene position: 3323946-3323299 (Counterclockwise)
Preceding gene: 113475775
Following gene: 113475772
Centisome position: 42.89
GC content: 39.81
Gene sequence:
>648_bases ATGTTTCAACAAACAGTCTGGATAGCAAGACACGGAAACCGTATCGACTTTGTTAACCCTGAATGGTTTAACACTGCCAA AAGACCATACGATCCCCATCTTTCAGATGATGGCGTTGTTCAAGCACAACAACTAGCAAAACGTTTAATTGGGGAAAATA TCACCCAAATTTTTGCTTCTCCCTTTTTACGAACTGTACAAACTGCCAATGAAATAGCAAAAGTTCTTGATTTAGCCATC AAATTAGATTGGGGTTTATGTGAATGGTTAAATCCAAAATGGATGCCTGCTATGCCAGAAACCCTGTCTAGAGAAAATCT TGCCCAAACTTATCCTAGAATCGACCTTTCTTACGATAGAGGTACTCCCAAATATCCCGAAACCTGGAAAGATTGTATGA AACGCACAGGAGAAGTTTCTAAGGGTTTGGTGAAAGAGTTTCCTACAGAAAATATTTTATTGGTGGGGCACGGTGTCTCA GTTATTGGTACTGCTGCTGGATTAGTTGGTGAAATTGCGGAAACTGAACTCAAGGCTCCTCTTTGTTGTTTGGTCAAAAT TGTTTTGCAAGAAGAGCAGTGGGTAATGGAATTAAGTGGGGATACTTCCCATCTAGATAATAGAGAAACTACTGTCAGGT TTGTTTAG
Upstream 100 bases:
>100_bases GTAGAGCAACAGCAGATTTATGGCTACTGTCTGAAAATTTAATTCCTTGAGATATGTTAATTACTATATATTAAGGTGAC AACCTGTCACAAATAAATTT
Downstream 100 bases:
>100_bases TGAATTGGGGAATAAGGAGTAGAGATTAGAAATTAGGGAAGGTTAAATACTGAAATTATAGGCATAATTATAAACAATGA TTAGCGGGGATTCCACAAAT
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: Phosphoglycerate Mutase Family Protein; Fructose-2 6-Bisphosphatase; Phosphoglycerate Mutase Family
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MFQQTVWIARHGNRIDFVNPEWFNTAKRPYDPHLSDDGVVQAQQLAKRLIGENITQIFASPFLRTVQTANEIAKVLDLAI KLDWGLCEWLNPKWMPAMPETLSRENLAQTYPRIDLSYDRGTPKYPETWKDCMKRTGEVSKGLVKEFPTENILLVGHGVS VIGTAAGLVGEIAETELKAPLCCLVKIVLQEEQWVMELSGDTSHLDNRETTVRFV
Sequences:
>Translated_215_residues MFQQTVWIARHGNRIDFVNPEWFNTAKRPYDPHLSDDGVVQAQQLAKRLIGENITQIFASPFLRTVQTANEIAKVLDLAI KLDWGLCEWLNPKWMPAMPETLSRENLAQTYPRIDLSYDRGTPKYPETWKDCMKRTGEVSKGLVKEFPTENILLVGHGVS VIGTAAGLVGEIAETELKAPLCCLVKIVLQEEQWVMELSGDTSHLDNRETTVRFV >Mature_215_residues MFQQTVWIARHGNRIDFVNPEWFNTAKRPYDPHLSDDGVVQAQQLAKRLIGENITQIFASPFLRTVQTANEIAKVLDLAI KLDWGLCEWLNPKWMPAMPETLSRENLAQTYPRIDLSYDRGTPKYPETWKDCMKRTGEVSKGLVKEFPTENILLVGHGVS VIGTAAGLVGEIAETELKAPLCCLVKIVLQEEQWVMELSGDTSHLDNRETTVRFV
Specific function: Unknown
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI17509755, Length=226, Percent_Identity=29.2035398230088, Blast_Score=84, Evalue=7e-17, Organism=Saccharomyces cerevisiae, GI6324684, Length=188, Percent_Identity=30.8510638297872, Blast_Score=69, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24396; Mature: 24396
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQQTVWIARHGNRIDFVNPEWFNTAKRPYDPHLSDDGVVQAQQLAKRLIGENITQIFAS CCCCEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH PFLRTVQTANEIAKVLDLAIKLDWGLCEWLNPKWMPAMPETLSRENLAQTYPRIDLSYDR HHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEECC GTPKYPETWKDCMKRTGEVSKGLVKEFPTENILLVGHGVSVIGTAAGLVGEIAETELKAP CCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCH LCCLVKIVLQEEQWVMELSGDTSHLDNRETTVRFV HHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEC >Mature Secondary Structure MFQQTVWIARHGNRIDFVNPEWFNTAKRPYDPHLSDDGVVQAQQLAKRLIGENITQIFAS CCCCEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH PFLRTVQTANEIAKVLDLAIKLDWGLCEWLNPKWMPAMPETLSRENLAQTYPRIDLSYDR HHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEECC GTPKYPETWKDCMKRTGEVSKGLVKEFPTENILLVGHGVSVIGTAAGLVGEIAETELKAP CCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCH LCCLVKIVLQEEQWVMELSGDTSHLDNRETTVRFV HHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA