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The map label for this gene is yebC [C]

Identifier: 113475772

GI number: 113475772

Start: 3321810

End: 3322571

Strand: Reverse

Name: yebC [C]

Synonym: Tery_2125

Alternate gene names: 113475772

Gene position: 3322571-3321810 (Counterclockwise)

Preceding gene: 113475773

Following gene: 113475768

Centisome position: 42.87

GC content: 41.34

Gene sequence:

>762_bases
ATGGCAGGACATAGTAAGTGGGCCAATATTAAACGCCAAAAAGCAAGAGTTGATGCTGTTAAAGGAAAAGTTTTCGCTAA
AGTATCTCGGCAAATTATTGTTGCTGCTCGCAGTGGAGCTGATCCTGCTGGTAATTTTCAGTTACGCACGGCGATAGAGA
AGGCAAAGACAGTAGGTATTCCCAATGATAATATTGAACGAGCGATCGCTAAAGGTTCAGGCCAATTAAATGATGGCAGT
CAATTGGAGGAGATTCGTTATGAGGGCTATGGTGCTGGAGGTATAGCAATTATAATTGAGGCCTTGACAGATAACCGCAA
CCGTACAGCAGCAGACCTAAGAAGTGCGTTTACCAAAAATGGTGGTAATTTAGGTGAGACTGGTTGCGTGAGTTGGATGT
TTGACCAAAAAGGTGTGGTTAGTATTACAGGAAGTTATGATGAGGATGAGTTACTCGAAGCATCTGTGGAAGGGGAAGCG
GAATATTATGAAGTAATTGCAGAAGATGATTTTCAAGGTGTGGAGGTTTTCACGGAAACTACTAATTTAGAAAATTTGAG
TCAGGTATTACAAGAGAAGGGCTTTGATATTAGTGAGGTAGAATTTCGGTGGGTTTCTGCTCATACTATTGAGGTGAGTG
ATCCGGAACAGGCGCGATCGCTTCTCAAGTTAATGGATGCTCTTGACGATCTTGATGATGTGCAGAATATTACTGCTAAT
TTCGATATAGCAAACAAACTTTTGAAGACTTTAGCTAGTTGA

Upstream 100 bases:

>100_bases
TCTGAGTACATTGTTTCAGCTCCCGGTACAGAGTATGTCAAGTGTAACTAGTTATGAAAATTACTGAAGTTAGGATATAT
TTTTTACAAGATTTGATTTT

Downstream 100 bases:

>100_bases
ATATTCTAAGTTATAGGGCTAGGAGCAAGTAAGATAGGATAGCAGTTAGATGGGCGAGGTACAGGAGTCAAAAATTAGAA
GTAATTTCTGAGGTGGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MAGHSKWANIKRQKARVDAVKGKVFAKVSRQIIVAARSGADPAGNFQLRTAIEKAKTVGIPNDNIERAIAKGSGQLNDGS
QLEEIRYEGYGAGGIAIIIEALTDNRNRTAADLRSAFTKNGGNLGETGCVSWMFDQKGVVSITGSYDEDELLEASVEGEA
EYYEVIAEDDFQGVEVFTETTNLENLSQVLQEKGFDISEVEFRWVSAHTIEVSDPEQARSLLKLMDALDDLDDVQNITAN
FDIANKLLKTLAS

Sequences:

>Translated_253_residues
MAGHSKWANIKRQKARVDAVKGKVFAKVSRQIIVAARSGADPAGNFQLRTAIEKAKTVGIPNDNIERAIAKGSGQLNDGS
QLEEIRYEGYGAGGIAIIIEALTDNRNRTAADLRSAFTKNGGNLGETGCVSWMFDQKGVVSITGSYDEDELLEASVEGEA
EYYEVIAEDDFQGVEVFTETTNLENLSQVLQEKGFDISEVEFRWVSAHTIEVSDPEQARSLLKLMDALDDLDDVQNITAN
FDIANKLLKTLAS
>Mature_252_residues
AGHSKWANIKRQKARVDAVKGKVFAKVSRQIIVAARSGADPAGNFQLRTAIEKAKTVGIPNDNIERAIAKGSGQLNDGSQ
LEEIRYEGYGAGGIAIIIEALTDNRNRTAADLRSAFTKNGGNLGETGCVSWMFDQKGVVSITGSYDEDELLEASVEGEAE
YYEVIAEDDFQGVEVFTETTNLENLSQVLQEKGFDISEVEFRWVSAHTIEVSDPEQARSLLKLMDALDDLDDVQNITANF
DIANKLLKTLAS

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=251, Percent_Identity=25.4980079681275, Blast_Score=86, Evalue=2e-17,
Organism=Escherichia coli, GI1788171, Length=252, Percent_Identity=42.0634920634921, Blast_Score=194, Evalue=5e-51,
Organism=Escherichia coli, GI1788294, Length=239, Percent_Identity=38.0753138075314, Blast_Score=141, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI17556100, Length=247, Percent_Identity=30.7692307692308, Blast_Score=87, Evalue=7e-18,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=34.6007604562738, Blast_Score=127, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24583305, Length=255, Percent_Identity=30.1960784313725, Blast_Score=91, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2125_TRIEI (Q113G4)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_721833.1
- ProteinModelPortal:   Q113G4
- SMR:   Q113G4
- STRING:   Q113G4
- GeneID:   4244097
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_2125
- NMPDR:   fig|203124.1.peg.6260
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- PhylomeDB:   Q113G4
- ProtClustDB:   PRK00110
- BioCyc:   TERY203124:TERY_2125-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 27607; Mature: 27476

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIKRQKARVDAVKGKVFAKVSRQIIVAARSGADPAGNFQLRTAIEKAKTVGI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHCCCC
PNDNIERAIAKGSGQLNDGSQLEEIRYEGYGAGGIAIIIEALTDNRNRTAADLRSAFTKN
CCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHEEEEHHHCCCCCHHHHHHHHHHCC
GGNLGETGCVSWMFDQKGVVSITGSYDEDELLEASVEGEAEYYEVIAEDDFQGVEVFTET
CCCCCCCHHEEEEECCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEC
TNLENLSQVLQEKGFDISEVEFRWVSAHTIEVSDPEQARSLLKLMDALDDLDDVQNITAN
CCHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCC
FDIANKLLKTLAS
HHHHHHHHHHHCC
>Mature Secondary Structure 
AGHSKWANIKRQKARVDAVKGKVFAKVSRQIIVAARSGADPAGNFQLRTAIEKAKTVGI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHCCCC
PNDNIERAIAKGSGQLNDGSQLEEIRYEGYGAGGIAIIIEALTDNRNRTAADLRSAFTKN
CCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHEEEEHHHCCCCCHHHHHHHHHHCC
GGNLGETGCVSWMFDQKGVVSITGSYDEDELLEASVEGEAEYYEVIAEDDFQGVEVFTET
CCCCCCCHHEEEEECCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEC
TNLENLSQVLQEKGFDISEVEFRWVSAHTIEVSDPEQARSLLKLMDALDDLDDVQNITAN
CCHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCC
FDIANKLLKTLAS
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA