The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475748

Identifier: 113475748

GI number: 113475748

Start: 3272360

End: 3272947

Strand: Reverse

Name: 113475748

Synonym: Tery_2097

Alternate gene names: NA

Gene position: 3272947-3272360 (Counterclockwise)

Preceding gene: 113475751

Following gene: 113475746

Centisome position: 42.23

GC content: 34.18

Gene sequence:

>588_bases
ATGGCAAATCTTAGCACATCTAGTCAAACTAAACCCGTATCAGAAAATAACTACTCTCCATCTGTACCTATTTCTTTATA
TAGAGAAACTACTGCTGAATTACAAGCAACTCAAATCAAGCTAGAGTCCCTTAAAGTTCATAATGAACAGTTAATTCAAC
AAAATCAAAAACTTAGAAAAGAAATTGAAAAAGTTATTAATTCTGCAATACATTTACAAGAAACATTAAATACTGCCCAA
TCAGTCATCCAGGTAACCCAACCGCAAATACCTTCTATACCGAACTCTCCGAGGATTAATACTACGGGCTCTAATTACTT
AAGTTCTGATTTTGAGCTGAACTCTCCTGAAATATTATCCCATTCTTCTCCCTCTCTACCATTTACCGAACCTAGAGCAA
AAAAGCCAAACTTTCCAGAACATTTATTTACAGAAGAACCAGACAAAAGTTACTACAGTAGATTTACCAATAGTACACAA
GTATCTAATTTGAATGGAATATCCTTAGTAATTGCTGTTTGTTTAATTGTAATTGCTGCATTTGGTGCTGGTTATTGGGT
AGTGCGACCAAAATTAAATCAGCGATAG

Upstream 100 bases:

>100_bases
AGTAAATTTAGTAAATGCTGTTGGTCAAATATTTCTGCACTAATAAATTAGTCAGGGATTACTTTGAACTTTTGACTTGT
TAGTATTACTTAGTAAAACA

Downstream 100 bases:

>100_bases
AAGTCTGTTCAACTTTGTTTTGTAAAAAAAATTGGTTTAAAGCCTGCCCCGCTTATTAAGTAACTTTTTAGTTTTTTTTT
AATAAATATGTTATTTCACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MANLSTSSQTKPVSENNYSPSVPISLYRETTAELQATQIKLESLKVHNEQLIQQNQKLRKEIEKVINSAIHLQETLNTAQ
SVIQVTQPQIPSIPNSPRINTTGSNYLSSDFELNSPEILSHSSPSLPFTEPRAKKPNFPEHLFTEEPDKSYYSRFTNSTQ
VSNLNGISLVIAVCLIVIAAFGAGYWVVRPKLNQR

Sequences:

>Translated_195_residues
MANLSTSSQTKPVSENNYSPSVPISLYRETTAELQATQIKLESLKVHNEQLIQQNQKLRKEIEKVINSAIHLQETLNTAQ
SVIQVTQPQIPSIPNSPRINTTGSNYLSSDFELNSPEILSHSSPSLPFTEPRAKKPNFPEHLFTEEPDKSYYSRFTNSTQ
VSNLNGISLVIAVCLIVIAAFGAGYWVVRPKLNQR
>Mature_194_residues
ANLSTSSQTKPVSENNYSPSVPISLYRETTAELQATQIKLESLKVHNEQLIQQNQKLRKEIEKVINSAIHLQETLNTAQS
VIQVTQPQIPSIPNSPRINTTGSNYLSSDFELNSPEILSHSSPSLPFTEPRAKKPNFPEHLFTEEPDKSYYSRFTNSTQV
SNLNGISLVIAVCLIVIAAFGAGYWVVRPKLNQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21794; Mature: 21663

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANLSTSSQTKPVSENNYSPSVPISLYRETTAELQATQIKLESLKVHNEQLIQQNQKLRK
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIEKVINSAIHLQETLNTAQSVIQVTQPQIPSIPNSPRINTTGSNYLSSDFELNSPEILS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHC
HSSPSLPFTEPRAKKPNFPEHLFTEEPDKSYYSRFTNSTQVSNLNGISLVIAVCLIVIAA
CCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
FGAGYWVVRPKLNQR
HCCCEEEECCCCCCC
>Mature Secondary Structure 
ANLSTSSQTKPVSENNYSPSVPISLYRETTAELQATQIKLESLKVHNEQLIQQNQKLRK
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIEKVINSAIHLQETLNTAQSVIQVTQPQIPSIPNSPRINTTGSNYLSSDFELNSPEILS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHC
HSSPSLPFTEPRAKKPNFPEHLFTEEPDKSYYSRFTNSTQVSNLNGISLVIAVCLIVIAA
CCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
FGAGYWVVRPKLNQR
HCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA