| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475746
Identifier: 113475746
GI number: 113475746
Start: 3270461
End: 3270847
Strand: Reverse
Name: 113475746
Synonym: Tery_2095
Alternate gene names: NA
Gene position: 3270847-3270461 (Counterclockwise)
Preceding gene: 113475748
Following gene: 113475745
Centisome position: 42.2
GC content: 27.13
Gene sequence:
>387_bases ATGAATCCAACTTTAGAATATATTTATAACCATCCAAAAGAAACAAAAAGAATTATTGGCATTACTTATGAACAGCTAAT AAAATTAATAGCAAAGGCCCAAATAATAGAATCAGAGAAAAAGAAGGCGATCGCTAAAACAGAAAAAAGATTAATTAAAG CAGGTGGAGTCAGAAAAAAGAATTTAACAAAGGAGGAAGAAATAATTTTAACGTTATTTTATTTACATCAAATACCGACT TTTCAAACATTAGGAATTAACTTTGGTATAAGTGAATCAAGTGCTAATAATATTTTTCATTACTGGATAGATATTCTCAG AGAATTACTGCCAGCAAGTTTATTAGAACAAGTAAAAAAAAAAAAGAAAATGAATTGGAATGGGTAA
Upstream 100 bases:
>100_bases ATTCAAGTGATATATCCAATTTTTATCAAAGGCAATAGACATCTCCAAAATAAAAAATAAGGTAAAATTATCAAAACCAT TTATTTATAAAGTCTCCCAA
Downstream 100 bases:
>100_bases AGGAGATATTAACAGAATTAGAATTAATTGTAGATAGTACAGAACAAAGTAGAGAAAGACCAAGTGAATATAAAGACCAA GAAAAATATTACTCAGGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MNPTLEYIYNHPKETKRIIGITYEQLIKLIAKAQIIESEKKKAIAKTEKRLIKAGGVRKKNLTKEEEIILTLFYLHQIPT FQTLGINFGISESSANNIFHYWIDILRELLPASLLEQVKKKKKMNWNG
Sequences:
>Translated_128_residues MNPTLEYIYNHPKETKRIIGITYEQLIKLIAKAQIIESEKKKAIAKTEKRLIKAGGVRKKNLTKEEEIILTLFYLHQIPT FQTLGINFGISESSANNIFHYWIDILRELLPASLLEQVKKKKKMNWNG >Mature_128_residues MNPTLEYIYNHPKETKRIIGITYEQLIKLIAKAQIIESEKKKAIAKTEKRLIKAGGVRKKNLTKEEEIILTLFYLHQIPT FQTLGINFGISESSANNIFHYWIDILRELLPASLLEQVKKKKKMNWNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14911; Mature: 14911
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPTLEYIYNHPKETKRIIGITYEQLIKLIAKAQIIESEKKKAIAKTEKRLIKAGGVRKK CCCHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NLTKEEEIILTLFYLHQIPTFQTLGINFGISESSANNIFHYWIDILRELLPASLLEQVKK CCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KKKMNWNG HHCCCCCC >Mature Secondary Structure MNPTLEYIYNHPKETKRIIGITYEQLIKLIAKAQIIESEKKKAIAKTEKRLIKAGGVRKK CCCHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NLTKEEEIILTLFYLHQIPTFQTLGINFGISESSANNIFHYWIDILRELLPASLLEQVKK CCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KKKMNWNG HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA