| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475684
Identifier: 113475684
GI number: 113475684
Start: 3152928
End: 3153203
Strand: Reverse
Name: 113475684
Synonym: Tery_2025
Alternate gene names: NA
Gene position: 3153203-3152928 (Counterclockwise)
Preceding gene: 113475687
Following gene: 113475682
Centisome position: 40.69
GC content: 40.22
Gene sequence:
>276_bases TTGGTTGTTAATAATCTCAGATACATAAGATTATTCAAAGACCCCCTGACTTTCGTCCTAAACTCCTTAGCTACCTTTGA AGTTGTTACTAATAACGAGAGTTTAATTACCTTCCTATTCGTCCACTTGTCAGCCTTTGCTAGAAGTCTCACTCATTTGG TAGTTAGAGCTTTGACCCCATTTAGACCAGCTTTAGGGATTGATGTTCAGTCTCTACCCTATGGCCTATGCTGTCAACCC AACAACAAGGTGGATGGAATTTCACCATCAAGGTAA
Upstream 100 bases:
>100_bases TTTCGACCTATTTACTTAGGTGTCTTAAATAGGTTTCCTCGTTCCATTATTCCTTTATTTCGATTGATTTAGTGGGGTAA ATTCTCCCGGAGGGTTCGGC
Downstream 100 bases:
>100_bases TAAGAGTTATTCACAAGTCGAGGTTGTCCTCATGTGATGACTTTGAACGGCCATTTATACCCAGTTTCCTGGTTTAGTGG CCAACGAGTCGCACGTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MVVNNLRYIRLFKDPLTFVLNSLATFEVVTNNESLITFLFVHLSAFARSLTHLVVRALTPFRPALGIDVQSLPYGLCCQP NNKVDGISPSR
Sequences:
>Translated_91_residues MVVNNLRYIRLFKDPLTFVLNSLATFEVVTNNESLITFLFVHLSAFARSLTHLVVRALTPFRPALGIDVQSLPYGLCCQP NNKVDGISPSR >Mature_91_residues MVVNNLRYIRLFKDPLTFVLNSLATFEVVTNNESLITFLFVHLSAFARSLTHLVVRALTPFRPALGIDVQSLPYGLCCQP NNKVDGISPSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10192; Mature: 10192
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVNNLRYIRLFKDPLTFVLNSLATFEVVTNNESLITFLFVHLSAFARSLTHLVVRALTP CCCCCEEEEEEHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC FRPALGIDVQSLPYGLCCQPNNKVDGISPSR CCCCCCCCCCCCCCCEEECCCCCCCCCCCCC >Mature Secondary Structure MVVNNLRYIRLFKDPLTFVLNSLATFEVVTNNESLITFLFVHLSAFARSLTHLVVRALTP CCCCCEEEEEEHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC FRPALGIDVQSLPYGLCCQPNNKVDGISPSR CCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA