The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475652

Identifier: 113475652

GI number: 113475652

Start: 3103111

End: 3103572

Strand: Reverse

Name: 113475652

Synonym: Tery_1989

Alternate gene names: NA

Gene position: 3103572-3103111 (Counterclockwise)

Preceding gene: 113475653

Following gene: 113475651

Centisome position: 40.05

GC content: 34.85

Gene sequence:

>462_bases
ATGACTGATTCTCAAAAAGTTCCTGTAGATGAAAAATTTGTACCTTTTCTCCAAAAAGTTCAGACTCAAGCAAGATTACC
GGATATTTACGATGCTAGAGATATTAGTATTATTATATTTCGGACAATGCGTGATTTGATGACAACAGAAGCATCTAATC
AGATCGCCTCAGACTTAGCTTCTAGTAGTGAAAAACCAGACCCAGATGAAATAGGAGAACTTTGGAAAGATAACAACCCA
CTTGTTGCTTTTCTTAGTAAAGTTCGTCGTCCACTTATATTTGATGGTAAGACTTTTATTTTCCGAGTTAGCCAAGAAGC
TGGAGTTCCTAAAGGAATAGCAGCTGAAACAGTAATTAAAGCAGTTTTTTCTGCTGTTAAAGAAGAATTATCAACTCAGA
GAATTCAAGAAATAGCTAAGTTTATGCCAGATGAAATTAAGATTATGTGGAACAAAGCTTAG

Upstream 100 bases:

>100_bases
TCTCTAATCCCTATTTTTAATAAAATTATAGTAAGACTTTTAATATTTGATATTAACTTATGATATCATCTAATAATCTA
ATAAAATTCAAGGTATAATT

Downstream 100 bases:

>100_bases
AAAGTTGATATTTTTTTCAGGTGTTATTGATTCTATTCAGTGGGGAAAGATTACTCTTTAAATTGAATTTTTTGCATTCA
ATATAAATTATAAATTGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MTDSQKVPVDEKFVPFLQKVQTQARLPDIYDARDISIIIFRTMRDLMTTEASNQIASDLASSSEKPDPDEIGELWKDNNP
LVAFLSKVRRPLIFDGKTFIFRVSQEAGVPKGIAAETVIKAVFSAVKEELSTQRIQEIAKFMPDEIKIMWNKA

Sequences:

>Translated_153_residues
MTDSQKVPVDEKFVPFLQKVQTQARLPDIYDARDISIIIFRTMRDLMTTEASNQIASDLASSSEKPDPDEIGELWKDNNP
LVAFLSKVRRPLIFDGKTFIFRVSQEAGVPKGIAAETVIKAVFSAVKEELSTQRIQEIAKFMPDEIKIMWNKA
>Mature_152_residues
TDSQKVPVDEKFVPFLQKVQTQARLPDIYDARDISIIIFRTMRDLMTTEASNQIASDLASSSEKPDPDEIGELWKDNNPL
VAFLSKVRRPLIFDGKTFIFRVSQEAGVPKGIAAETVIKAVFSAVKEELSTQRIQEIAKFMPDEIKIMWNKA

Specific function: Unknown

COG id: COG5502

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17332; Mature: 17201

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSQKVPVDEKFVPFLQKVQTQARLPDIYDARDISIIIFRTMRDLMTTEASNQIASDLA
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SSSEKPDPDEIGELWKDNNPLVAFLSKVRRPLIFDGKTFIFRVSQEAGVPKGIAAETVIK
HCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCEEECCCEEEEEECHHCCCCCCHHHHHHHH
AVFSAVKEELSTQRIQEIAKFMPDEIKIMWNKA
HHHHHHHHHHHHHHHHHHHHHCCHHHHEEECCC
>Mature Secondary Structure 
TDSQKVPVDEKFVPFLQKVQTQARLPDIYDARDISIIIFRTMRDLMTTEASNQIASDLA
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SSSEKPDPDEIGELWKDNNPLVAFLSKVRRPLIFDGKTFIFRVSQEAGVPKGIAAETVIK
HCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCEEECCCEEEEEECHHCCCCCCHHHHHHHH
AVFSAVKEELSTQRIQEIAKFMPDEIKIMWNKA
HHHHHHHHHHHHHHHHHHHHHCCHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA