Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475651

Identifier: 113475651

GI number: 113475651

Start: 3101583

End: 3102569

Strand: Reverse

Name: 113475651

Synonym: Tery_1988

Alternate gene names: NA

Gene position: 3102569-3101583 (Counterclockwise)

Preceding gene: 113475652

Following gene: 113475650

Centisome position: 40.03

GC content: 31.0

Gene sequence:

>987_bases
ATGAGAAAAACAGCTTTTATACCTTTCTTAGCTAAACTAGGTAAGGCTTTAACTAAGAAAAAAATTACTGTTTTACAGAT
TAATATTGGTAGACGTTGTAATCTTGCTTGTACTCATTGTCATGTGGAAGCTAGTCCAAAAAGAACAGAAGAACTTAGTA
AAGAAATTTGTGAACAATTAATTGAGTTAATTAATAGATTTCCTCAAATTCAAACAGTTGATTTGACCGGGGGCGCACCA
GAAATGAATTATGGTTTTAAACCCTTAGTTGAAGCTGCAATAAAAAATAATAAAGAAGTAATTGTTCGTTCTAATTTGAC
AATTTATTTTGTGCCAGGGTTTGAAGATATTCCACAGTATTGTGCTGAAAATAAACTCAGAATTATTGCATCGTTACCTT
GTTATTTAGAAGATAATGTAGATAAAATGCGTGGCAATGGTGTTTATCAAAAGTCTATTAGGGCATTGCAATGGTTGAAT
AGATTAGGATACGGACAAAATCAAAGTATGATATTAGATTTAGTTTATAATCCTCCAGTCCCGAATAGTTATAAGTTTGC
ACTTCCTGCCAATCAAAAAAATTTAGAACAAGACTATAAAAGTTATTTAAAAGAACATTTCAACGTCAAATTTAATCAAC
TATTTACAATTACTAATTTACCTATAGGTAGAACTAGGCTTTTTCTAGAAAACCTAAAGATACATCAACCTTATTTAGAC
TTCTTAGAGGCAAATTTTAATGGTGAAACTATAGAAAATTTAATGTGCCGGAACGAGTTATCAATTGATTATTTAGGTAA
TGTTTATGACTGTGACTTTAATCAAATGGAAAATATTCCGGCTAAAACTTCAAAAGGTGAAACAATTACAGTAGCTAAGT
TATTAGAAGGTAATAGTTTAGACATAATTGAACAAGTACAGACAGCAAATTATTGTTACGGTTGTACCGCAGGTTGTGGA
TCTAGCTGCGGTGGAGCACTAGTATAA

Upstream 100 bases:

>100_bases
AAATTTATAAAGTTGAATTTCGAGTTAAATTTGTATATTTATTGATCATATGACTTATTCCCTTCTTTATTTTTTCAATT
AGTTATTAAAATTTATTGCA

Downstream 100 bases:

>100_bases
ATGAGACAATGTAATATGATAAAAACTATTTATGTGTAATAGAAATGTCCGAAAAATCATATAGAAAATTACATGAAACT
TCTTATCAAGAATTTGAAAA

Product: radical SAM family protein

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Fe-S Oxidoreductase; L-Asparaginase II; Radical SAM Superfamily Protein; Radical SAM Family Protein; Fe-S Oxidoreductases; NifB/MoaA Family Fe-S Oxidoreductase; Fe-S Oxidoreductase Of MoaA/NifB/PqqE Family

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MRKTAFIPFLAKLGKALTKKKITVLQINIGRRCNLACTHCHVEASPKRTEELSKEICEQLIELINRFPQIQTVDLTGGAP
EMNYGFKPLVEAAIKNNKEVIVRSNLTIYFVPGFEDIPQYCAENKLRIIASLPCYLEDNVDKMRGNGVYQKSIRALQWLN
RLGYGQNQSMILDLVYNPPVPNSYKFALPANQKNLEQDYKSYLKEHFNVKFNQLFTITNLPIGRTRLFLENLKIHQPYLD
FLEANFNGETIENLMCRNELSIDYLGNVYDCDFNQMENIPAKTSKGETITVAKLLEGNSLDIIEQVQTANYCYGCTAGCG
SSCGGALV

Sequences:

>Translated_328_residues
MRKTAFIPFLAKLGKALTKKKITVLQINIGRRCNLACTHCHVEASPKRTEELSKEICEQLIELINRFPQIQTVDLTGGAP
EMNYGFKPLVEAAIKNNKEVIVRSNLTIYFVPGFEDIPQYCAENKLRIIASLPCYLEDNVDKMRGNGVYQKSIRALQWLN
RLGYGQNQSMILDLVYNPPVPNSYKFALPANQKNLEQDYKSYLKEHFNVKFNQLFTITNLPIGRTRLFLENLKIHQPYLD
FLEANFNGETIENLMCRNELSIDYLGNVYDCDFNQMENIPAKTSKGETITVAKLLEGNSLDIIEQVQTANYCYGCTAGCG
SSCGGALV
>Mature_328_residues
MRKTAFIPFLAKLGKALTKKKITVLQINIGRRCNLACTHCHVEASPKRTEELSKEICEQLIELINRFPQIQTVDLTGGAP
EMNYGFKPLVEAAIKNNKEVIVRSNLTIYFVPGFEDIPQYCAENKLRIIASLPCYLEDNVDKMRGNGVYQKSIRALQWLN
RLGYGQNQSMILDLVYNPPVPNSYKFALPANQKNLEQDYKSYLKEHFNVKFNQLFTITNLPIGRTRLFLENLKIHQPYLD
FLEANFNGETIENLMCRNELSIDYLGNVYDCDFNQMENIPAKTSKGETITVAKLLEGNSLDIIEQVQTANYCYGCTAGCG
SSCGGALV

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37147; Mature: 37147

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKTAFIPFLAKLGKALTKKKITVLQINIGRRCNLACTHCHVEASPKRTEELSKEICEQL
CCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHH
IELINRFPQIQTVDLTGGAPEMNYGFKPLVEAAIKNNKEVIVRSNLTIYFVPGFEDIPQY
HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCEEEEEECCHHHHHHH
CAENKLRIIASLPCYLEDNVDKMRGNGVYQKSIRALQWLNRLGYGQNQSMILDLVYNPPV
HHCCCEEEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC
PNSYKFALPANQKNLEQDYKSYLKEHFNVKFNQLFTITNLPIGRTRLFLENLKIHQPYLD
CCCEEEEECCCHHHHHHHHHHHHHHHCCCEEHEEEEEECCCCCHHHHHHHHCCCCCHHHH
FLEANFNGETIENLMCRNELSIDYLGNVYDCDFNQMENIPAKTSKGETITVAKLLEGNSL
HHHCCCCCHHHHHHHHHCCCCHHHCCCEEECCHHHHCCCCCCCCCCCEEEEEEECCCCCH
DIIEQVQTANYCYGCTAGCGSSCGGALV
HHHHHHHHCCCEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MRKTAFIPFLAKLGKALTKKKITVLQINIGRRCNLACTHCHVEASPKRTEELSKEICEQL
CCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHH
IELINRFPQIQTVDLTGGAPEMNYGFKPLVEAAIKNNKEVIVRSNLTIYFVPGFEDIPQY
HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCEEEEEECCHHHHHHH
CAENKLRIIASLPCYLEDNVDKMRGNGVYQKSIRALQWLNRLGYGQNQSMILDLVYNPPV
HHCCCEEEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC
PNSYKFALPANQKNLEQDYKSYLKEHFNVKFNQLFTITNLPIGRTRLFLENLKIHQPYLD
CCCEEEEECCCHHHHHHHHHHHHHHHCCCEEHEEEEEECCCCCHHHHHHHHCCCCCHHHH
FLEANFNGETIENLMCRNELSIDYLGNVYDCDFNQMENIPAKTSKGETITVAKLLEGNSL
HHHCCCCCHHHHHHHHHCCCCHHHCCCEEECCHHHHCCCCCCCCCCCEEEEEEECCCCCH
DIIEQVQTANYCYGCTAGCGSSCGGALV
HHHHHHHHCCCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA