| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is nadE [H]
Identifier: 113475647
GI number: 113475647
Start: 3093311
End: 3095065
Strand: Reverse
Name: nadE [H]
Synonym: Tery_1984
Alternate gene names: 113475647
Gene position: 3095065-3093311 (Counterclockwise)
Preceding gene: 113475648
Following gene: 113475646
Centisome position: 39.94
GC content: 32.88
Gene sequence:
>1755_bases ATGAAAATTGCAATTGCTCAACTTAATCCTGTGATTGGTGATATTTCAGGCAATGCCAAATTAATTTTGGATGCTGCACA AAAAGCAAAAAAATTAGATGCTAAGTTGATGATAACTCCAGAATTATCATTAATAGGTTATCCCCCACGAGATTTATTAA TTTATCCTAGTTTAATTGAAGCTGCAGTTCTAGAATTAGAAAATTTAGCCAAATATTTACCATCAGAAATAGCCGTTTTA GTAGGAACTGTAACCTTTAATTATCAAGCCGCTAATACAGGAGAAAAATCACTATTTAATAGTGCAGTTTTATTAACCAA TGGCGAAATCAAACAAGTATTTCATAAACAACTTTTACCTACTTATGATGTATTTGATGAAGACCGATATTTTGAACCTG GTAAAACTAGGGATTTTTTCACGTTAGAAAATTATTCTAACAGCTCAGAAAATTTAGCTAAAGTAGGTGTAACTATCTGC GAAGACTTATGGAATGATGAGGCTTTTTGGGGAAAACGAAATTATGCTTATGACCCGATGAAAGAATTAGCAGCACAAAA AGTTGATTTTGTGATTAATATGTCAGCTTCTCCCTATCAAACTGGAAAACAAAAATTGCGAGAAGCAATGTTAAAACATA GTACAAATTGTTATCAAATACCAATTATTTATGTCAATCAAGTGGGTGGTAATGATGATTTAATTTTTGATGGTTGTAGT GTAGTTTTTAATGGTGCTGGAAATGTGGTTTATCGTGCTCAAGCTTTTGAGACAAGTTTGGCAGTTGTAGAATTTAATTC AGCAAAAAAAGATTTCATTTCAGTAGATTTTAAAAGTATAAATTTGCCAGAAAGTGAGGATGAAGAAATTTGGTCTGCTT TGGTTTTAGGCCTAAGAGATTATGTACAAAAGTGTGGTTTTTCTAAAGTTGTTCTGGGTTTAAGTGGAGGAATAGACTCA GCTTTAGTTGCAGCGATCGCTACTGCTGCATTAGGAAAAGAAAATGTCTTTGCTATTTTGATGCCTTCTCCCTACAGTTC TGAGCATTCGGTAAAAGATGCTTTAGAATTAGCAGAAAATTTGGGTATTGCTAAACAAATTATATCTATTGAGAATTTAA TGAAGGATTATGATAATAGTCTGTCAAGTTTATTTACAGGTACAAATTTTGGTATTGCTGAAGAGAATATTCAATCTCGG ATTCGTGGAAATTTATTAATGGCTATTTCTAATAAGTTTGGTTATTTACTTTTATCTACAGGCAATAAGTCAGAAATGGC TGTTGGTTATTGTACTCTTTATGGTGATATGAATGGTGGATTAGCAGTAATTTCAGATGTGCCGAAAACTCGGGTTTATT CTTTATGTCAGTGGTTGAATGAACAGACAGTTAATAACAATAAAAAATTCTCTGGATCCCAAAACTTACTAATGACTGAA AAGCAAAATATTATTCCCAAAAATATACTGACAAAAGCTCCCAGTGCTGAGTTAAAAGAAGGTCAAAAGGATGAGGATTC TTTACCTGCTTATGAAGTCTTAGATGATATTTTATTTAGGTTAGTAGAAAAGTGCGAATCTTTAGACAAAATTATTGCTG CAGGACATGATTTAGAGGTGGTAAATAAGGTAGTAAAATTAGTCATGAGGGCAGAATTTAAACGTAGACAAGCACCCCCA GGTTTGAAAATTAGTACTCGCGCTTTTGGCACAGGTTGGCGGATGCCTATTGCTAAAAAATTAGTTATTAACTGA
Upstream 100 bases:
>100_bases TATAAATTAATAATATGATAACATATTAATAAAATAAAAACGAATTTACAAAGTCGCCCTAGAAGAGCGATCGCTCAGAC CAAACTTTTCAGTAAAAATT
Downstream 100 bases:
>100_bases CTATTAGCACTCACAAATATTTTAAGTTTTAGTAGGCTTGGTGGTTTTAGGTTTTAAGAGCAAAGATAGAAAATGATTGA AGTAAAAAGTTATGAAGATG
Product: NAD synthetase
Products: NA
Alternate protein names: NAD(+) synthase [glutamine-hydrolyzing] [H]
Number of amino acids: Translated: 584; Mature: 584
Protein sequence:
>584_residues MKIAIAQLNPVIGDISGNAKLILDAAQKAKKLDAKLMITPELSLIGYPPRDLLIYPSLIEAAVLELENLAKYLPSEIAVL VGTVTFNYQAANTGEKSLFNSAVLLTNGEIKQVFHKQLLPTYDVFDEDRYFEPGKTRDFFTLENYSNSSENLAKVGVTIC EDLWNDEAFWGKRNYAYDPMKELAAQKVDFVINMSASPYQTGKQKLREAMLKHSTNCYQIPIIYVNQVGGNDDLIFDGCS VVFNGAGNVVYRAQAFETSLAVVEFNSAKKDFISVDFKSINLPESEDEEIWSALVLGLRDYVQKCGFSKVVLGLSGGIDS ALVAAIATAALGKENVFAILMPSPYSSEHSVKDALELAENLGIAKQIISIENLMKDYDNSLSSLFTGTNFGIAEENIQSR IRGNLLMAISNKFGYLLLSTGNKSEMAVGYCTLYGDMNGGLAVISDVPKTRVYSLCQWLNEQTVNNNKKFSGSQNLLMTE KQNIIPKNILTKAPSAELKEGQKDEDSLPAYEVLDDILFRLVEKCESLDKIIAAGHDLEVVNKVVKLVMRAEFKRRQAPP GLKISTRAFGTGWRMPIAKKLVIN
Sequences:
>Translated_584_residues MKIAIAQLNPVIGDISGNAKLILDAAQKAKKLDAKLMITPELSLIGYPPRDLLIYPSLIEAAVLELENLAKYLPSEIAVL VGTVTFNYQAANTGEKSLFNSAVLLTNGEIKQVFHKQLLPTYDVFDEDRYFEPGKTRDFFTLENYSNSSENLAKVGVTIC EDLWNDEAFWGKRNYAYDPMKELAAQKVDFVINMSASPYQTGKQKLREAMLKHSTNCYQIPIIYVNQVGGNDDLIFDGCS VVFNGAGNVVYRAQAFETSLAVVEFNSAKKDFISVDFKSINLPESEDEEIWSALVLGLRDYVQKCGFSKVVLGLSGGIDS ALVAAIATAALGKENVFAILMPSPYSSEHSVKDALELAENLGIAKQIISIENLMKDYDNSLSSLFTGTNFGIAEENIQSR IRGNLLMAISNKFGYLLLSTGNKSEMAVGYCTLYGDMNGGLAVISDVPKTRVYSLCQWLNEQTVNNNKKFSGSQNLLMTE KQNIIPKNILTKAPSAELKEGQKDEDSLPAYEVLDDILFRLVEKCESLDKIIAAGHDLEVVNKVVKLVMRAEFKRRQAPP GLKISTRAFGTGWRMPIAKKLVIN >Mature_584_residues MKIAIAQLNPVIGDISGNAKLILDAAQKAKKLDAKLMITPELSLIGYPPRDLLIYPSLIEAAVLELENLAKYLPSEIAVL VGTVTFNYQAANTGEKSLFNSAVLLTNGEIKQVFHKQLLPTYDVFDEDRYFEPGKTRDFFTLENYSNSSENLAKVGVTIC EDLWNDEAFWGKRNYAYDPMKELAAQKVDFVINMSASPYQTGKQKLREAMLKHSTNCYQIPIIYVNQVGGNDDLIFDGCS VVFNGAGNVVYRAQAFETSLAVVEFNSAKKDFISVDFKSINLPESEDEEIWSALVLGLRDYVQKCGFSKVVLGLSGGIDS ALVAAIATAALGKENVFAILMPSPYSSEHSVKDALELAENLGIAKQIISIENLMKDYDNSLSSLFTGTNFGIAEENIQSR IRGNLLMAISNKFGYLLLSTGNKSEMAVGYCTLYGDMNGGLAVISDVPKTRVYSLCQWLNEQTVNNNKKFSGSQNLLMTE KQNIIPKNILTKAPSAELKEGQKDEDSLPAYEVLDDILFRLVEKCESLDKIIAAGHDLEVVNKVVKLVMRAEFKRRQAPP GLKISTRAFGTGWRMPIAKKLVIN
Specific function: Can use both glutamine or ammonia as a nitrogen source [H]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014445 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR003010 - InterPro: IPR014729 [H]
Pfam domain/function: PF00795 CN_hydrolase; PF02540 NAD_synthase [H]
EC number: =6.3.5.1 [H]
Molecular weight: Translated: 64514; Mature: 64514
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAIAQLNPVIGDISGNAKLILDAAQKAKKLDAKLMITPELSLIGYPPRDLLIYPSLIE CEEEEEECCCEEEECCCCCEEEEEHHHHHHHCCCEEEEECCCEEECCCCHHEEECHHHHH AAVLELENLAKYLPSEIAVLVGTVTFNYQAANTGEKSLFNSAVLLTNGEIKQVFHKQLLP HHHHHHHHHHHHCCHHHEEEEEEEEEEEEECCCCCHHHHCCEEEEECCHHHHHHHHHCCC TYDVFDEDRYFEPGKTRDFFTLENYSNSSENLAKVGVTICEDLWNDEAFWGKRNYAYDPM CCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH KELAAQKVDFVINMSASPYQTGKQKLREAMLKHSTNCYQIPIIYVNQVGGNDDLIFDGCS HHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCEEEECCE VVFNGAGNVVYRAQAFETSLAVVEFNSAKKDFISVDFKSINLPESEDEEIWSALVLGLRD EEECCCCCEEEEEEHHCCEEEEEEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHH YVQKCGFSKVVLGLSGGIDSALVAAIATAALGKENVFAILMPSPYSSEHSVKDALELAEN HHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHH LGIAKQIISIENLMKDYDNSLSSLFTGTNFGIAEENIQSRIRGNLLMAISNKFGYLLLST CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCCEEEEEC GNKSEMAVGYCTLYGDMNGGLAVISDVPKTRVYSLCQWLNEQTVNNNKKFSGSQNLLMTE CCCCCEEEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEC KQNIIPKNILTKAPSAELKEGQKDEDSLPAYEVLDDILFRLVEKCESLDKIIAAGHDLEV CCCCCCHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VNKVVKLVMRAEFKRRQAPPGLKISTRAFGTGWRMPIAKKLVIN HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHCCC >Mature Secondary Structure MKIAIAQLNPVIGDISGNAKLILDAAQKAKKLDAKLMITPELSLIGYPPRDLLIYPSLIE CEEEEEECCCEEEECCCCCEEEEEHHHHHHHCCCEEEEECCCEEECCCCHHEEECHHHHH AAVLELENLAKYLPSEIAVLVGTVTFNYQAANTGEKSLFNSAVLLTNGEIKQVFHKQLLP HHHHHHHHHHHHCCHHHEEEEEEEEEEEEECCCCCHHHHCCEEEEECCHHHHHHHHHCCC TYDVFDEDRYFEPGKTRDFFTLENYSNSSENLAKVGVTICEDLWNDEAFWGKRNYAYDPM CCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH KELAAQKVDFVINMSASPYQTGKQKLREAMLKHSTNCYQIPIIYVNQVGGNDDLIFDGCS HHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCEEEECCE VVFNGAGNVVYRAQAFETSLAVVEFNSAKKDFISVDFKSINLPESEDEEIWSALVLGLRD EEECCCCCEEEEEEHHCCEEEEEEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHH YVQKCGFSKVVLGLSGGIDSALVAAIATAALGKENVFAILMPSPYSSEHSVKDALELAEN HHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHH LGIAKQIISIENLMKDYDNSLSSLFTGTNFGIAEENIQSRIRGNLLMAISNKFGYLLLST CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCCEEEEEC GNKSEMAVGYCTLYGDMNGGLAVISDVPKTRVYSLCQWLNEQTVNNNKKFSGSQNLLMTE CCCCCEEEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEC KQNIIPKNILTKAPSAELKEGQKDEDSLPAYEVLDDILFRLVEKCESLDKIIAAGHDLEV CCCCCCHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VNKVVKLVMRAEFKRRQAPPGLKISTRAFGTGWRMPIAKKLVIN HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]