| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is manC2 [H]
Identifier: 113475524
GI number: 113475524
Start: 2840104
End: 2841153
Strand: Reverse
Name: manC2 [H]
Synonym: Tery_1856
Alternate gene names: 113475524
Gene position: 2841153-2840104 (Counterclockwise)
Preceding gene: 113475526
Following gene: 113475522
Centisome position: 36.66
GC content: 44.0
Gene sequence:
>1050_bases ATGATACCTGTTATTCTTGCTGGTGGAAAAGGAGAACGTTTTTGGCCCCTGAGTCGTAAGCATCGGCCTAAACAGTTTCT TTCTCTTGACGGTAGTGGTAAAAGTTTGTTACAAACCACAGCACAGAGACTACTCCCATTATCTAATGATTGGGGTGGTT TATGGGTTGTGACTTCGGCAATGTTGGCCGCAGGTGTGGCACAACAGTTACCCCAAATACCACAGGAAAATATATTGGCA GAACCGGAAGGAAGGGATACTGCTCCTGCTGTTGCTTGGACAACAATAGAAGCGGCACATCGTTATGGGGAAGATATAGT TGTTGGATTTTTTCCAGCTGACCATTGGATCGGTGAGCCAGAAATATTCCATAAGACTCTGGAGGCAGCAGCAGAATTGG CCACTAACCAGGAGGCTATTGTCACCCTAGGTGTGAAACCTTCTTTTCCTTCTACTGGTTATGGGTATATTGAACAGGGA AAAAAAGCAGGAAATTTTGGCGGGTTTGACGTTTATCAGGTGGCACGGTTTACAGAAAAGCCTAACCGAGAGAAGGCGGA GGAGTTTTTAGCAACGGGGCGTTTTAGTTGGAATGGCGGTATTTTTGTTTTCAGGGTGGGGGTGATGTTGGCGGAGTTGC GAAAATATGTGCCAACAATGATGACTGTTTTGGAGACGATGGGTCCTGGGGGTTATTCTCAGTTGGAGAAAAAGAGTATT GACTATGCAGTGATGGAGAAGACTGATAAGGCTTTTGTGTTACCTGTGGCTTTTGGTTGGGATGATTTGGGTGACTGGAA TGGTTTGGAACGTTTGGTTAAGGGGGATAGTGTGAATGTGGAGTTGGCTAATCATTTGGGGTTGGATACGAAGAGGTCGA TTTTTTTTGCTACCGATGATGATGATACTATTGTAACTATTGGTTTGGAGGATGTGGTTGTTGTTAGGGATGGGAATGTG ACTTTGATTGTTAAAAAGGAGCGATCGCAGGATATTAAGAAGGTTTTGAAGAGTTTGGCTAATCATCCTAAGTTTAAGGA TTTATTGTAG
Upstream 100 bases:
>100_bases GCAGTTTAAAAGTTTACTAATCTACTTAATAATTTTGGAGAAACTGACAATCAAAACTTAAAATGGAATTATTTAAGTCT ATTAAATAATCTAGAATCTG
Downstream 100 bases:
>100_bases GGGAGGAGAAAGGAAGAAGGAAGCAGGAGGGAATAGTTGTAGGAATAGGTGTAGGTTTGGTTGCGCTGTCGCTTAACCTA ACAAAAACTTATATGAAAGT
Product: mannose-1-phosphate guanylyltransferase
Products: NA
Alternate protein names: GDP-mannose pyrophosphorylase 2; GMP 2; GMPP 2 [H]
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MIPVILAGGKGERFWPLSRKHRPKQFLSLDGSGKSLLQTTAQRLLPLSNDWGGLWVVTSAMLAAGVAQQLPQIPQENILA EPEGRDTAPAVAWTTIEAAHRYGEDIVVGFFPADHWIGEPEIFHKTLEAAAELATNQEAIVTLGVKPSFPSTGYGYIEQG KKAGNFGGFDVYQVARFTEKPNREKAEEFLATGRFSWNGGIFVFRVGVMLAELRKYVPTMMTVLETMGPGGYSQLEKKSI DYAVMEKTDKAFVLPVAFGWDDLGDWNGLERLVKGDSVNVELANHLGLDTKRSIFFATDDDDTIVTIGLEDVVVVRDGNV TLIVKKERSQDIKKVLKSLANHPKFKDLL
Sequences:
>Translated_349_residues MIPVILAGGKGERFWPLSRKHRPKQFLSLDGSGKSLLQTTAQRLLPLSNDWGGLWVVTSAMLAAGVAQQLPQIPQENILA EPEGRDTAPAVAWTTIEAAHRYGEDIVVGFFPADHWIGEPEIFHKTLEAAAELATNQEAIVTLGVKPSFPSTGYGYIEQG KKAGNFGGFDVYQVARFTEKPNREKAEEFLATGRFSWNGGIFVFRVGVMLAELRKYVPTMMTVLETMGPGGYSQLEKKSI DYAVMEKTDKAFVLPVAFGWDDLGDWNGLERLVKGDSVNVELANHLGLDTKRSIFFATDDDDTIVTIGLEDVVVVRDGNV TLIVKKERSQDIKKVLKSLANHPKFKDLL >Mature_349_residues MIPVILAGGKGERFWPLSRKHRPKQFLSLDGSGKSLLQTTAQRLLPLSNDWGGLWVVTSAMLAAGVAQQLPQIPQENILA EPEGRDTAPAVAWTTIEAAHRYGEDIVVGFFPADHWIGEPEIFHKTLEAAAELATNQEAIVTLGVKPSFPSTGYGYIEQG KKAGNFGGFDVYQVARFTEKPNREKAEEFLATGRFSWNGGIFVFRVGVMLAELRKYVPTMMTVLETMGPGGYSQLEKKSI DYAVMEKTDKAFVLPVAFGWDDLGDWNGLERLVKGDSVNVELANHLGLDTKRSIFFATDDDDTIVTIGLEDVVVVRDGNV TLIVKKERSQDIKKVLKSLANHPKFKDLL
Specific function: Involved in GDP-mannose biosynthesis which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. This enzyme participates in synthesis of the LPS O antigen [H]
COG id: COG0836
COG function: function code M; Mannose-1-phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788362, Length=359, Percent_Identity=35.0974930362117, Blast_Score=196, Evalue=3e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR006375 - InterPro: IPR001538 - InterPro: IPR005835 - InterPro: IPR014710 [H]
Pfam domain/function: PF01050 MannoseP_isomer; PF00483 NTP_transferase [H]
EC number: =2.7.7.13 [H]
Molecular weight: Translated: 38538; Mature: 38538
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPVILAGGKGERFWPLSRKHRPKQFLSLDGSGKSLLQTTAQRLLPLSNDWGGLWVVTSA CCEEEEECCCCCEECCCCCCCCCHHHEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH MLAAGVAQQLPQIPQENILAEPEGRDTAPAVAWTTIEAAHRYGEDIVVGFFPADHWIGEP HHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEEHHHHHHHHHCCCEEEEEEECHHHCCCCH EIFHKTLEAAAELATNQEAIVTLGVKPSFPSTGYGYIEQGKKAGNFGGFDVYQVARFTEK HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHCC PNREKAEEFLATGRFSWNGGIFVFRVGVMLAELRKYVPTMMTVLETMGPGGYSQLEKKSI CCHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC DYAVMEKTDKAFVLPVAFGWDDLGDWNGLERLVKGDSVNVELANHLGLDTKRSIFFATDD CCCEEECCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEHHHCCCCCCCEEEEEECC DDTIVTIGLEDVVVVRDGNVTLIVKKERSQDIKKVLKSLANHPKFKDLL CCEEEEEECCEEEEEECCCEEEEEECCHHHHHHHHHHHHHCCCCHHCCC >Mature Secondary Structure MIPVILAGGKGERFWPLSRKHRPKQFLSLDGSGKSLLQTTAQRLLPLSNDWGGLWVVTSA CCEEEEECCCCCEECCCCCCCCCHHHEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH MLAAGVAQQLPQIPQENILAEPEGRDTAPAVAWTTIEAAHRYGEDIVVGFFPADHWIGEP HHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEEHHHHHHHHHCCCEEEEEEECHHHCCCCH EIFHKTLEAAAELATNQEAIVTLGVKPSFPSTGYGYIEQGKKAGNFGGFDVYQVARFTEK HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHCC PNREKAEEFLATGRFSWNGGIFVFRVGVMLAELRKYVPTMMTVLETMGPGGYSQLEKKSI CCHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC DYAVMEKTDKAFVLPVAFGWDDLGDWNGLERLVKGDSVNVELANHLGLDTKRSIFFATDD CCCEEECCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEHHHCCCCCCCEEEEEECC DDTIVTIGLEDVVVVRDGNVTLIVKKERSQDIKKVLKSLANHPKFKDLL CCEEEEEECCEEEEEECCCEEEEEECCHHHHHHHHHHHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9673232; 11206551; 11258796 [H]