Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475522

Identifier: 113475522

GI number: 113475522

Start: 2837742

End: 2838011

Strand: Reverse

Name: 113475522

Synonym: Tery_1854

Alternate gene names: NA

Gene position: 2838011-2837742 (Counterclockwise)

Preceding gene: 113475524

Following gene: 113475521

Centisome position: 36.62

GC content: 32.96

Gene sequence:

>270_bases
ATGGCAGGTGCTAGTGATGGCTATGTTACCATTGCTGGCAACTTATTTGCACTGTTAATAAATTATCTCGGACACAGTGG
TGGTCGCACCTATATGTCGGACATGAAGGCTCATATAGAAATTACTAATACATTCTTCTATCCTGATATTATGGTAATTT
GCGACGCCAGAGATAAAGCTTTGCCAAATCATAAAAAATATATTTGTTTAATAGTGGAAATTTTATTTGATCAAAAACTT
GCTAATTATTTTGTTTTTCCAACTATTTAA

Upstream 100 bases:

>100_bases
GATTGCTAACTAAAACACAAATTACATTCCTCCTGAAGAATATTTAAAAGAAGAATTTAGCCCTATTAAACACAAATATA
TTGATGGACAATTATATGCA

Downstream 100 bases:

>100_bases
ATAATTTCCCGTTGGCTATTACATTCTATTAATGGTTTATATTCACTGGGAGTAAGCCAAGATAAATTCACGGGTTTTCC
TAAGGCGATCGCTAAAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MAGASDGYVTIAGNLFALLINYLGHSGGRTYMSDMKAHIEITNTFFYPDIMVICDARDKALPNHKKYICLIVEILFDQKL
ANYFVFPTI

Sequences:

>Translated_89_residues
MAGASDGYVTIAGNLFALLINYLGHSGGRTYMSDMKAHIEITNTFFYPDIMVICDARDKALPNHKKYICLIVEILFDQKL
ANYFVFPTI
>Mature_88_residues
AGASDGYVTIAGNLFALLINYLGHSGGRTYMSDMKAHIEITNTFFYPDIMVICDARDKALPNHKKYICLIVEILFDQKLA
NYFVFPTI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10026; Mature: 9895

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGASDGYVTIAGNLFALLINYLGHSGGRTYMSDMKAHIEITNTFFYPDIMVICDARDKA
CCCCCCCEEEEHHHHHHHHHHHHCCCCCCCHHCCCEEEEEEEEEEECCCEEEEECCCCCC
LPNHKKYICLIVEILFDQKLANYFVFPTI
CCCCCHHHHHHHHHHHHHHHHCEEEECCC
>Mature Secondary Structure 
AGASDGYVTIAGNLFALLINYLGHSGGRTYMSDMKAHIEITNTFFYPDIMVICDARDKA
CCCCCCEEEEHHHHHHHHHHHHCCCCCCCHHCCCEEEEEEEEEEECCCEEEEECCCCCC
LPNHKKYICLIVEILFDQKLANYFVFPTI
CCCCCHHHHHHHHHHHHHHHHCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA