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The map label for this gene is 113475495

Identifier: 113475495

GI number: 113475495

Start: 2788062

End: 2788973

Strand: Reverse

Name: 113475495

Synonym: Tery_1827

Alternate gene names: NA

Gene position: 2788973-2788062 (Counterclockwise)

Preceding gene: 113475496

Following gene: 113475493

Centisome position: 35.99

GC content: 38.05

Gene sequence:

>912_bases
ATGAATTTACCAGTTATTTATCATCCTAATTATGTGGCACCAATTCCACCTGGTCATCGCTTTCCCATGGCAAAATTTCA
ATTACTTTATGAAATGTTATTGGTAGATGAGGTAACAAACTATTTCTTGACTCCAAATTTTCCACCTTTAGAATGGATAG
AATTAATACATCATCCCAACTATATAAAAAAATATTGTCAGGGAACTTTAGACCCAAAAGCACAAAGACGTATTGGTTTG
CCCTGGAGTCAAGCATTAGCAAATCGAACTTGCATTGCTGTGGGTGGTACAATATTAACAGCACAGTTAGCCCTCAAACA
TGGTTTAGCTTGTAATACTGCTGGTGGTACTCATCATGCATTTCCCAGTTATGGATCTGGGTTCTGTATTTTTAATGATT
TAGCGATCGCCACTCGTGTGATGCAAAAATTAGGATTAGTTGAAAAAGTTTTAATAGTAGATTTAGACGTACATCAAGGA
GATGGCACTGCCTGGATATTTCAAGATGATCCTACTGTATTTACATTTTCTATGCACTGTGGTATAAACTTTCCTAGTAG
AAAACAAGTTAGCGATCTAGATGTACCTTTACCAGAAGGAATGGATGACGAGCTTTATCTCCAGACATTAGCACAACACT
TACCATATTTGCTATCAGAAGTCAAGCCAGATTTGGTATTGTATGATGCGGGAGTTGATACCCATATCCATGATGCTTTA
GGAAAATTAGCTTTAACAGATACAGGAATATTCCGGCGGGAGATGCAAGTATTAAGTACCTGTCTAGGAAAAGGTTATCC
AGTGGCTTCTGTCATTGGCGGTGGCTATACTAAGGATATGAATTCATTGGTTTACACTCATTCATTATTGCATCGTGCTG
CCCGAGACGTGTTTTACCAGTATCGGCTTTGA

Upstream 100 bases:

>100_bases
AAGACCTGAATACTTAGAAAAAATTTAATTTTTTAGTTTTAATTTTTTAGTTTTAATTTTTTAGTTTTAATTTTTTAGTT
TTAATTTTTTGACTTAATTA

Downstream 100 bases:

>100_bases
GAAGTTATAGGGCTACGGGCAACTCAGAAGTCAGAAGCCGCGAAGTCAGAACTAGGAAGTTTTCATTCTCCACCCTAAAA
TTTTCGGGTGAGAGATTTAT

Product: histone deacetylase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MNLPVIYHPNYVAPIPPGHRFPMAKFQLLYEMLLVDEVTNYFLTPNFPPLEWIELIHHPNYIKKYCQGTLDPKAQRRIGL
PWSQALANRTCIAVGGTILTAQLALKHGLACNTAGGTHHAFPSYGSGFCIFNDLAIATRVMQKLGLVEKVLIVDLDVHQG
DGTAWIFQDDPTVFTFSMHCGINFPSRKQVSDLDVPLPEGMDDELYLQTLAQHLPYLLSEVKPDLVLYDAGVDTHIHDAL
GKLALTDTGIFRREMQVLSTCLGKGYPVASVIGGGYTKDMNSLVYTHSLLHRAARDVFYQYRL

Sequences:

>Translated_303_residues
MNLPVIYHPNYVAPIPPGHRFPMAKFQLLYEMLLVDEVTNYFLTPNFPPLEWIELIHHPNYIKKYCQGTLDPKAQRRIGL
PWSQALANRTCIAVGGTILTAQLALKHGLACNTAGGTHHAFPSYGSGFCIFNDLAIATRVMQKLGLVEKVLIVDLDVHQG
DGTAWIFQDDPTVFTFSMHCGINFPSRKQVSDLDVPLPEGMDDELYLQTLAQHLPYLLSEVKPDLVLYDAGVDTHIHDAL
GKLALTDTGIFRREMQVLSTCLGKGYPVASVIGGGYTKDMNSLVYTHSLLHRAARDVFYQYRL
>Mature_303_residues
MNLPVIYHPNYVAPIPPGHRFPMAKFQLLYEMLLVDEVTNYFLTPNFPPLEWIELIHHPNYIKKYCQGTLDPKAQRRIGL
PWSQALANRTCIAVGGTILTAQLALKHGLACNTAGGTHHAFPSYGSGFCIFNDLAIATRVMQKLGLVEKVLIVDLDVHQG
DGTAWIFQDDPTVFTFSMHCGINFPSRKQVSDLDVPLPEGMDDELYLQTLAQHLPYLLSEVKPDLVLYDAGVDTHIHDAL
GKLALTDTGIFRREMQVLSTCLGKGYPVASVIGGGYTKDMNSLVYTHSLLHRAARDVFYQYRL

Specific function: Putative deacetylase [H]

COG id: COG0123

COG function: function code BQ; Deacetylases, including yeast histone deacetylase and acetoin utilization protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the histone deacetylase family [H]

Homologues:

Organism=Homo sapiens, GI217272877, Length=194, Percent_Identity=32.9896907216495, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI209862883, Length=194, Percent_Identity=32.9896907216495, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI13128860, Length=199, Percent_Identity=32.1608040201005, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI8923769, Length=214, Percent_Identity=31.7757009345794, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI293336691, Length=171, Percent_Identity=32.1637426900585, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI20070354, Length=190, Percent_Identity=35.7894736842105, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI13128864, Length=204, Percent_Identity=32.843137254902, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI148539870, Length=150, Percent_Identity=37.3333333333333, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI169234807, Length=150, Percent_Identity=37.3333333333333, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI30795204, Length=163, Percent_Identity=34.9693251533742, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI17158039, Length=163, Percent_Identity=34.9693251533742, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI30795202, Length=163, Percent_Identity=34.9693251533742, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI262073092, Length=139, Percent_Identity=35.9712230215827, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI153085395, Length=151, Percent_Identity=35.0993377483444, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI62750347, Length=146, Percent_Identity=35.6164383561644, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI62750349, Length=146, Percent_Identity=35.6164383561644, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI13128862, Length=195, Percent_Identity=29.2307692307692, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI226529806, Length=77, Percent_Identity=45.4545454545455, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI262073088, Length=186, Percent_Identity=29.5698924731183, Blast_Score=65, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI193207430, Length=320, Percent_Identity=30.3125, Blast_Score=133, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17534739, Length=306, Percent_Identity=27.1241830065359, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI193206283, Length=176, Percent_Identity=33.5227272727273, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17540332, Length=176, Percent_Identity=33.5227272727273, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17540334, Length=176, Percent_Identity=33.5227272727273, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17508561, Length=199, Percent_Identity=31.1557788944724, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17537347, Length=213, Percent_Identity=31.924882629108, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI193209491, Length=214, Percent_Identity=32.2429906542056, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17561978, Length=204, Percent_Identity=31.3725490196078, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI25154022, Length=213, Percent_Identity=27.6995305164319, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI25154020, Length=213, Percent_Identity=27.6995305164319, Blast_Score=69, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6321244, Length=246, Percent_Identity=28.8617886178862, Blast_Score=89, Evalue=6e-19,
Organism=Saccharomyces cerevisiae, GI6323999, Length=201, Percent_Identity=31.3432835820896, Blast_Score=86, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6325325, Length=192, Percent_Identity=31.25, Blast_Score=85, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6324307, Length=205, Percent_Identity=26.8292682926829, Blast_Score=64, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24649807, Length=313, Percent_Identity=30.0319488817891, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24642142, Length=185, Percent_Identity=35.1351351351351, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24642144, Length=185, Percent_Identity=35.1351351351351, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI281360899, Length=185, Percent_Identity=35.1351351351351, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24642146, Length=185, Percent_Identity=35.1351351351351, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24657891, Length=199, Percent_Identity=30.6532663316583, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24644244, Length=218, Percent_Identity=29.8165137614679, Blast_Score=82, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000286 [H]

Pfam domain/function: PF00850 Hist_deacetyl [H]

EC number: NA

Molecular weight: Translated: 33870; Mature: 33870

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLPVIYHPNYVAPIPPGHRFPMAKFQLLYEMLLVDEVTNYFLTPNFPPLEWIELIHHPN
CCCCEEECCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCH
YIKKYCQGTLDPKAQRRIGLPWSQALANRTCIAVGGTILTAQLALKHGLACNTAGGTHHA
HHHHHHCCCCCHHHHHHCCCCHHHHHHCCEEEEECCHHHHHHHHHHCCCEECCCCCCCCC
FPSYGSGFCIFNDLAIATRVMQKLGLVEKVLIVDLDVHQGDGTAWIFQDDPTVFTFSMHC
CCCCCCCEEEEHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCEEEEEECCCCEEEEEEEE
GINFPSRKQVSDLDVPLPEGMDDELYLQTLAQHLPYLLSEVKPDLVLYDAGVDTHIHDAL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH
GKLALTDTGIFRREMQVLSTCLGKGYPVASVIGGGYTKDMNSLVYTHSLLHRAARDVFYQ
HHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
YRL
CCC
>Mature Secondary Structure
MNLPVIYHPNYVAPIPPGHRFPMAKFQLLYEMLLVDEVTNYFLTPNFPPLEWIELIHHPN
CCCCEEECCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCH
YIKKYCQGTLDPKAQRRIGLPWSQALANRTCIAVGGTILTAQLALKHGLACNTAGGTHHA
HHHHHHCCCCCHHHHHHCCCCHHHHHHCCEEEEECCHHHHHHHHHHCCCEECCCCCCCCC
FPSYGSGFCIFNDLAIATRVMQKLGLVEKVLIVDLDVHQGDGTAWIFQDDPTVFTFSMHC
CCCCCCCEEEEHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCEEEEEECCCCEEEEEEEE
GINFPSRKQVSDLDVPLPEGMDDELYLQTLAQHLPYLLSEVKPDLVLYDAGVDTHIHDAL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH
GKLALTDTGIFRREMQVLSTCLGKGYPVASVIGGGYTKDMNSLVYTHSLLHRAARDVFYQ
HHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
YRL
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7678591 [H]