Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475493

Identifier: 113475493

GI number: 113475493

Start: 2785682

End: 2786209

Strand: Reverse

Name: 113475493

Synonym: Tery_1824

Alternate gene names: NA

Gene position: 2786209-2785682 (Counterclockwise)

Preceding gene: 113475495

Following gene: 113475492

Centisome position: 35.95

GC content: 37.31

Gene sequence:

>528_bases
ATGGAAACAACAGAAAAAAATTCCTCTAACCTAATTCAGAAAATGCTTAATATTATAGCCCTCTTATTAGTAATAATTCT
CATTGTTGTCGGAATAAATATTGCCACTTCTGGCAAACTCACTTTATTTGCAGGTACTAGACCTGATAATATTGGTGTAA
ACTCTGGACGTCTTGCACCTTGTCCTGGTAGTCCAAATTGTGTGAGTAGTTATAGCCAAGATGTAGAACATGGTATTGCT
TCTCTGAGTTATGACTCTGAACCGCAGATGGCGATCGCTAATTTAAAACAAATAATTGAATCAATGCCTCGAACTAATAT
TGTAAAGGAAGAAGAGAATTATTTGTATGCTGAATTTGCTACGAAAATTATGGGCTATGTGGATGATGTCGAGTTTTATG
TGGATCAAGAAGCTAATGCTATTCAAGTCCGCTCTGCTTCTCGTCTGGGACAATCAGATCTGGGTGTTAACCGGGAACGA
GTCGAAACTATTAGAGAAAAGCTGAAGGAACTCAAAACCAATACTTAG

Upstream 100 bases:

>100_bases
GTCTTTCATAATTTTTTTTGCTTTAGAGCCACAATAATTGTTATGATTGGGGTTAAGATAATACTTGGTAAACTTAACCA
AATTATTTCTTTGATAGACT

Downstream 100 bases:

>100_bases
CAAAGGTTAAAACCTAGTACCTTGCCTCAAGCCATAGCTCCAACTCACAATAAGCAATTAAGTTGAAATTTGGTTTAATA
ATTATTGTATAGTTCAGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
METTEKNSSNLIQKMLNIIALLLVIILIVVGINIATSGKLTLFAGTRPDNIGVNSGRLAPCPGSPNCVSSYSQDVEHGIA
SLSYDSEPQMAIANLKQIIESMPRTNIVKEEENYLYAEFATKIMGYVDDVEFYVDQEANAIQVRSASRLGQSDLGVNRER
VETIREKLKELKTNT

Sequences:

>Translated_175_residues
METTEKNSSNLIQKMLNIIALLLVIILIVVGINIATSGKLTLFAGTRPDNIGVNSGRLAPCPGSPNCVSSYSQDVEHGIA
SLSYDSEPQMAIANLKQIIESMPRTNIVKEEENYLYAEFATKIMGYVDDVEFYVDQEANAIQVRSASRLGQSDLGVNRER
VETIREKLKELKTNT
>Mature_175_residues
METTEKNSSNLIQKMLNIIALLLVIILIVVGINIATSGKLTLFAGTRPDNIGVNSGRLAPCPGSPNCVSSYSQDVEHGIA
SLSYDSEPQMAIANLKQIIESMPRTNIVKEEENYLYAEFATKIMGYVDDVEFYVDQEANAIQVRSASRLGQSDLGVNRER
VETIREKLKELKTNT

Specific function: Unknown

COG id: COG4446

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19310; Mature: 19310

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METTEKNSSNLIQKMLNIIALLLVIILIVVGINIATSGKLTLFAGTRPDNIGVNSGRLAP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
CPGSPNCVSSYSQDVEHGIASLSYDSEPQMAIANLKQIIESMPRTNIVKEEENYLYAEFA
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
TKIMGYVDDVEFYVDQEANAIQVRSASRLGQSDLGVNRERVETIREKLKELKTNT
HHHHHHHHHHHHHCCCCCCEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
METTEKNSSNLIQKMLNIIALLLVIILIVVGINIATSGKLTLFAGTRPDNIGVNSGRLAP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
CPGSPNCVSSYSQDVEHGIASLSYDSEPQMAIANLKQIIESMPRTNIVKEEENYLYAEFA
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
TKIMGYVDDVEFYVDQEANAIQVRSASRLGQSDLGVNRERVETIREKLKELKTNT
HHHHHHHHHHHHHCCCCCCEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA