The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475474

Identifier: 113475474

GI number: 113475474

Start: 2753595

End: 2754209

Strand: Reverse

Name: 113475474

Synonym: Tery_1805

Alternate gene names: NA

Gene position: 2754209-2753595 (Counterclockwise)

Preceding gene: 113475475

Following gene: 113475473

Centisome position: 35.54

GC content: 34.15

Gene sequence:

>615_bases
ATGTTGAATAATCAACAGATACAAATAGAGTGTAATGAAATATTTACACCAGAACAAATTCTAGAAAATCGTGGCAGAGT
AGCCATTTTTATTGATGGATCTAACTTATTTTATGCTGCTTTACAGTTAGGAATTGAGATAGATTATACAAAACTTCTTT
GTCGTCTAACTGGAGGTTCTCGTCTTCTACGTTCCTTTTTCTATACGGGAGTAGATCGTACTAATGAAAAACAGCAGGGG
TTTTTGCTGTGGATGCGTCGTAATGGTTATCGTGTTATTTCTAAAGACTTAGTACAATTACCTGATGGTTCTAAAAAAGC
TAATCTAGATGTAGAAATTGCTGTTGATATGATGGCTTTAGTTGGTTCTTATGATACTGCTATATTAGTCAGTGGAGATG
GAGATTTAGCTTATGCTGTAGATGCTGTTAGTTATAGAGGTGTTAGGGTTGAAGTTGTTAGTCTTAGAGCTATGACTAGC
GATAGTTTAATTAATGTTTCTGACCGCTATATAGATCTGGAACAAATTAAAGAAGACATCCAAAAAACTTCAAAATCTCC
TAGCTATACTTATCGTCCTCTATCAGCGATAGGTTTAATTGATGAACATGATTAA

Upstream 100 bases:

>100_bases
AATTGTACCCTTTTCTACTGCATAGCTTTTTTTCTGTTACAAATTATCTCTGATTAAGAATTAATTTTTTTTATTTAATA
AAAAACTGAGGTTAAAAACC

Downstream 100 bases:

>100_bases
AGATAATATTTGCTTTAGTTTAAATTGGAAAAATCGGCAAATTTTAGAATAGTAATCAATGTAAAAGTAGTGTTAATTTT
TCTTGAAATTAGCATATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MLNNQQIQIECNEIFTPEQILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQQG
FLLWMRRNGYRVISKDLVQLPDGSKKANLDVEIAVDMMALVGSYDTAILVSGDGDLAYAVDAVSYRGVRVEVVSLRAMTS
DSLINVSDRYIDLEQIKEDIQKTSKSPSYTYRPLSAIGLIDEHD

Sequences:

>Translated_204_residues
MLNNQQIQIECNEIFTPEQILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQQG
FLLWMRRNGYRVISKDLVQLPDGSKKANLDVEIAVDMMALVGSYDTAILVSGDGDLAYAVDAVSYRGVRVEVVSLRAMTS
DSLINVSDRYIDLEQIKEDIQKTSKSPSYTYRPLSAIGLIDEHD
>Mature_204_residues
MLNNQQIQIECNEIFTPEQILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQQG
FLLWMRRNGYRVISKDLVQLPDGSKKANLDVEIAVDMMALVGSYDTAILVSGDGDLAYAVDAVSYRGVRVEVVSLRAMTS
DSLINVSDRYIDLEQIKEDIQKTSKSPSYTYRPLSAIGLIDEHD

Specific function: Unknown

COG id: COG1432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22972; Mature: 22972

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNNQQIQIECNEIFTPEQILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGS
CCCCCEEEEEECCCCCHHHHHHCCCCEEEEEECCCCEEEEEHHCCEECHHHEEEEECCCH
RLLRSFFYTGVDRTNEKQQGFLLWMRRNGYRVISKDLVQLPDGSKKANLDVEIAVDMMAL
HHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEECHHHHCCCCCCCCCCEEEEEHHHHHHH
VGSYDTAILVSGDGDLAYAVDAVSYRGVRVEVVSLRAMTSDSLINVSDRYIDLEQIKEDI
HCCCCEEEEEECCCCEEEEEECCEECCEEEEEEEEEEECCCCEEECCHHEEEHHHHHHHH
QKTSKSPSYTYRPLSAIGLIDEHD
HHHCCCCCEEECCHHEEEEEECCC
>Mature Secondary Structure
MLNNQQIQIECNEIFTPEQILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGS
CCCCCEEEEEECCCCCHHHHHHCCCCEEEEEECCCCEEEEEHHCCEECHHHEEEEECCCH
RLLRSFFYTGVDRTNEKQQGFLLWMRRNGYRVISKDLVQLPDGSKKANLDVEIAVDMMAL
HHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEECHHHHCCCCCCCCCCEEEEEHHHHHHH
VGSYDTAILVSGDGDLAYAVDAVSYRGVRVEVVSLRAMTSDSLINVSDRYIDLEQIKEDI
HCCCCEEEEEECCCCEEEEEECCEECCEEEEEEEEEEECCCCEEECCHHEEEHHHHHHHH
QKTSKSPSYTYRPLSAIGLIDEHD
HHHCCCCCEEECCHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA