| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475447
Identifier: 113475447
GI number: 113475447
Start: 2708761
End: 2709930
Strand: Reverse
Name: 113475447
Synonym: Tery_1776
Alternate gene names: NA
Gene position: 2709930-2708761 (Counterclockwise)
Preceding gene: 113475448
Following gene: 113475446
Centisome position: 34.97
GC content: 38.97
Gene sequence:
>1170_bases ATGAAAGTTACATCAGAGTGTATCAAAAGTAATTACGATAAAAGTAATGCCGTTGAACATTACCTATCTAAAGATCGTCG TGATGGTGTAAAAGTTGAGTGGGAAGAGCCATTTTCTTGTTCGGTTTTTAAGAAAGCGATTAGGTTGTCCCATAAAATTA AAAAAGATAAGCTAAAAGTTCTTGATATAGGATCCGGCACAGGGGATGGATATGAGTTGCTTAAAAAGCTCTTCAAGGAA TATAAGGAAATTAGTAATTATCAACTAGAATATCTTGGCATTGATATTAGCCCCCAAATGGTGAAGGCGGCTAATGATTT GTACGCAAAAGAAAATCATGTTAGGTTTAAGTGTGAAGATATTCGTCACAGCAACATTACTGATTTTTTTGATGTATATC TTTCCTGTGGAGTTCCTTACTCTCATTTGACTAACGATGAGCTTTACCAAGCCATCAAAACAATTGTTACTAATGTTCGC AAGTATAATTCCAGGTGTGCGGTAGTTGTAGATGTATTGGGACGCTACAGCATTGAGTGGACACCTAAATGGAATGAAAC TCGTTGGGACTACTCTATGAGCTTTTTTGAGAGCGAAGGACATGCGGAACCTACATGGATGAGTTTTTACTCCCATGATG ATTTGCAAAATATTATGCAGAAGGCAGCTGATGCTGTTGGCTGTCCTGTTGAGAGATTTCAGTTTTTCGATCGCTCAATT ATGGTGGGGCGTCATACTTCTACAGGACAATTTAACCCAAAATTACCGAATTATCGTAATTTGATTAACAGTTTAATGGA GCCTGGTGAAGAGACAGAGTTGAATAAGCTGATTTTTCAAGTGGAGTTGACAACTGCACCAAAACATATTTTGGAATTCT TTGAAAAATTCTCCGGTTGGTGGAATTTATTAGTGAGTCAGGCAGGGGCTATCTTAGGTGAGTCTATAGAGGTGGAACTT GTTGACTTGCCTCAAGAGGTTCAAGGGTTTAAGGCGGAACTTGATAAAGAGTTCCAACAGATTTCTGGAAAAGACGCCCG CCGACAAAAAGTTGAGCTCATGTTGGCTCAAGTATTGCAAAAATTGGAGGCAACACAGCAACCAGGTTATGGTGTTGGTC ATGATCTGTTTGGGGTAATGTGGTTAGATGCTAGGGGACTTGATAGTTAA
Upstream 100 bases:
>100_bases TTGATCATTATTTGAAATACATTCACTATCATTAATTAGTGTTTTCGCGTAAGTCCTTCATCCTGAATGTTGCCCATAGT TATAAAGTTATTGGTTTTTT
Downstream 100 bases:
>100_bases ATAAGAACTTACTATACTTATTGAAACTTACACATATATATGGATTTTGTCGCAGTATTAATAATAAGCGAAAACTATAT GAATAAGTAGCTTGAAGCTT
Product: type 12 methyltransferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MKVTSECIKSNYDKSNAVEHYLSKDRRDGVKVEWEEPFSCSVFKKAIRLSHKIKKDKLKVLDIGSGTGDGYELLKKLFKE YKEISNYQLEYLGIDISPQMVKAANDLYAKENHVRFKCEDIRHSNITDFFDVYLSCGVPYSHLTNDELYQAIKTIVTNVR KYNSRCAVVVDVLGRYSIEWTPKWNETRWDYSMSFFESEGHAEPTWMSFYSHDDLQNIMQKAADAVGCPVERFQFFDRSI MVGRHTSTGQFNPKLPNYRNLINSLMEPGEETELNKLIFQVELTTAPKHILEFFEKFSGWWNLLVSQAGAILGESIEVEL VDLPQEVQGFKAELDKEFQQISGKDARRQKVELMLAQVLQKLEATQQPGYGVGHDLFGVMWLDARGLDS
Sequences:
>Translated_389_residues MKVTSECIKSNYDKSNAVEHYLSKDRRDGVKVEWEEPFSCSVFKKAIRLSHKIKKDKLKVLDIGSGTGDGYELLKKLFKE YKEISNYQLEYLGIDISPQMVKAANDLYAKENHVRFKCEDIRHSNITDFFDVYLSCGVPYSHLTNDELYQAIKTIVTNVR KYNSRCAVVVDVLGRYSIEWTPKWNETRWDYSMSFFESEGHAEPTWMSFYSHDDLQNIMQKAADAVGCPVERFQFFDRSI MVGRHTSTGQFNPKLPNYRNLINSLMEPGEETELNKLIFQVELTTAPKHILEFFEKFSGWWNLLVSQAGAILGESIEVEL VDLPQEVQGFKAELDKEFQQISGKDARRQKVELMLAQVLQKLEATQQPGYGVGHDLFGVMWLDARGLDS >Mature_389_residues MKVTSECIKSNYDKSNAVEHYLSKDRRDGVKVEWEEPFSCSVFKKAIRLSHKIKKDKLKVLDIGSGTGDGYELLKKLFKE YKEISNYQLEYLGIDISPQMVKAANDLYAKENHVRFKCEDIRHSNITDFFDVYLSCGVPYSHLTNDELYQAIKTIVTNVR KYNSRCAVVVDVLGRYSIEWTPKWNETRWDYSMSFFESEGHAEPTWMSFYSHDDLQNIMQKAADAVGCPVERFQFFDRSI MVGRHTSTGQFNPKLPNYRNLINSLMEPGEETELNKLIFQVELTTAPKHILEFFEKFSGWWNLLVSQAGAILGESIEVEL VDLPQEVQGFKAELDKEFQQISGKDARRQKVELMLAQVLQKLEATQQPGYGVGHDLFGVMWLDARGLDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44885; Mature: 44885
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVTSECIKSNYDKSNAVEHYLSKDRRDGVKVEWEEPFSCSVFKKAIRLSHKIKKDKLKV CCCCHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEE LDIGSGTGDGYELLKKLFKEYKEISNYQLEYLGIDISPQMVKAANDLYAKENHVRFKCED EECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCCCEEEECC IRHSNITDFFDVYLSCGVPYSHLTNDELYQAIKTIVTNVRKYNSRCAVVVDVLGRYSIEW CCCCCCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEE TPKWNETRWDYSMSFFESEGHAEPTWMSFYSHDDLQNIMQKAADAVGCPVERFQFFDRSI CCCCCCCCCCHHHHHHCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHCCCE MVGRHTSTGQFNPKLPNYRNLINSLMEPGEETELNKLIFQVELTTAPKHILEFFEKFSGW EEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHEEEEEEECCCHHHHHHHHHHHHHH WNLLVSQAGAILGESIEVELVDLPQEVQGFKAELDKEFQQISGKDARRQKVELMLAQVLQ HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH KLEATQQPGYGVGHDLFGVMWLDARGLDS HHHHHCCCCCCCCHHHHHEEEECCCCCCC >Mature Secondary Structure MKVTSECIKSNYDKSNAVEHYLSKDRRDGVKVEWEEPFSCSVFKKAIRLSHKIKKDKLKV CCCCHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEE LDIGSGTGDGYELLKKLFKEYKEISNYQLEYLGIDISPQMVKAANDLYAKENHVRFKCED EECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCCCEEEECC IRHSNITDFFDVYLSCGVPYSHLTNDELYQAIKTIVTNVRKYNSRCAVVVDVLGRYSIEW CCCCCCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEE TPKWNETRWDYSMSFFESEGHAEPTWMSFYSHDDLQNIMQKAADAVGCPVERFQFFDRSI CCCCCCCCCCHHHHHHCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHCCCE MVGRHTSTGQFNPKLPNYRNLINSLMEPGEETELNKLIFQVELTTAPKHILEFFEKFSGW EEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHEEEEEEECCCHHHHHHHHHHHHHH WNLLVSQAGAILGESIEVELVDLPQEVQGFKAELDKEFQQISGKDARRQKVELMLAQVLQ HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH KLEATQQPGYGVGHDLFGVMWLDARGLDS HHHHHCCCCCCCCHHHHHEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA