| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is surE [C]
Identifier: 113475446
GI number: 113475446
Start: 2706719
End: 2707417
Strand: Reverse
Name: surE [C]
Synonym: Tery_1774
Alternate gene names: 113475446
Gene position: 2707417-2706719 (Counterclockwise)
Preceding gene: 113475447
Following gene: 113475445
Centisome position: 34.93
GC content: 43.49
Gene sequence:
>699_bases ATGGTAACGTCTTTTTTAATCACTAATGATGATGGTATTGACGCTCCTGGAATTCGTGCATTACATAAGGCACTATCCCA AGTGACTTCGGACCGCATTGTTATGGTTGCACCGAAACACCACCAGTCCGGCTGTGGCCATCAAGTCAATATCCGCACAG TTATACCAGTAGAATGGCGTTCTGAAACTGAGGTGAGTGTTGATAGTACGCCGGCTGACTGTGTTCGTTTGGGGGTAAAC TATCTGTATGATGATATCAATTTTGTGGTCTCTGGAGTTAATAGCGGCTGTAATATGGGCTCGGATATTTATCCTTCTGG AACTATTGCAGCGGCTAGAGAGGCTACAATACATCGAATTCCAGCGATCGCTTTTTCTCATTTTAAGAGAAATGACTGGG AAATTGACTGGGAAAGAGCAATACAGTGGACGGTGATGGTCTTGAAGAAGTTATTAGCTGAACCACCTGAGGAAGGAACT TTATGGACGGTTAATTTTCCCCACCTTGAACCTGATGCACCTGAGCCTGAAATGGTTTTTTGTCGCCTCTGTAACCGCCC TCTACTTACAGAATTTGTTAAAAAAGAGAACGGATATCTTTATGTGGGATACGATCTTAACCGAAAGTCTGATCCAGGGA CTGATGTTGATGTGTGTTTATCGGGAAATATTGCTATAGCTAAGGCTCGCTTATGGTGA
Upstream 100 bases:
>100_bases AGCTTAGGGATGTACCTGACCTTTACTATTGGGTATATTCTCTTTGCTGCTCAAGAAAATAGAAGTTGTGTTGTTTAATT TATTTTAATTTATTGATGTT
Downstream 100 bases:
>100_bases CATCCTTCCCGGCTGCTGTGTAACCTTAAAAAATTAGCTGTAGCTTTGATGGGAGTTGATATTGACTTCTGCAACCTAAA ATTTGCTACCTAAAACTTGC
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase [H]
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MVTSFLITNDDGIDAPGIRALHKALSQVTSDRIVMVAPKHHQSGCGHQVNIRTVIPVEWRSETEVSVDSTPADCVRLGVN YLYDDINFVVSGVNSGCNMGSDIYPSGTIAAAREATIHRIPAIAFSHFKRNDWEIDWERAIQWTVMVLKKLLAEPPEEGT LWTVNFPHLEPDAPEPEMVFCRLCNRPLLTEFVKKENGYLYVGYDLNRKSDPGTDVDVCLSGNIAIAKARLW
Sequences:
>Translated_232_residues MVTSFLITNDDGIDAPGIRALHKALSQVTSDRIVMVAPKHHQSGCGHQVNIRTVIPVEWRSETEVSVDSTPADCVRLGVN YLYDDINFVVSGVNSGCNMGSDIYPSGTIAAAREATIHRIPAIAFSHFKRNDWEIDWERAIQWTVMVLKKLLAEPPEEGT LWTVNFPHLEPDAPEPEMVFCRLCNRPLLTEFVKKENGYLYVGYDLNRKSDPGTDVDVCLSGNIAIAKARLW >Mature_232_residues MVTSFLITNDDGIDAPGIRALHKALSQVTSDRIVMVAPKHHQSGCGHQVNIRTVIPVEWRSETEVSVDSTPADCVRLGVN YLYDDINFVVSGVNSGCNMGSDIYPSGTIAAAREATIHRIPAIAFSHFKRNDWEIDWERAIQWTVMVLKKLLAEPPEEGT LWTVNFPHLEPDAPEPEMVFCRLCNRPLLTEFVKKENGYLYVGYDLNRKSDPGTDVDVCLSGNIAIAKARLW
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates [H]
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family [H]
Homologues:
Organism=Escherichia coli, GI1789101, Length=170, Percent_Identity=35.8823529411765, Blast_Score=94, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002828 [H]
Pfam domain/function: PF01975 SurE [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 25910; Mature: 25910
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTSFLITNDDGIDAPGIRALHKALSQVTSDRIVMVAPKHHQSGCGHQVNIRTVIPVEWR CCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEEEEEEC SETEVSVDSTPADCVRLGVNYLYDDINFVVSGVNSGCNMGSDIYPSGTIAAAREATIHRI CCCCEEECCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH PAIAFSHFKRNDWEIDWERAIQWTVMVLKKLLAEPPEEGTLWTVNFPHLEPDAPEPEMVF HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHH CRLCNRPLLTEFVKKENGYLYVGYDLNRKSDPGTDVDVCLSGNIAIAKARLW HHHCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEECCEEEEEEECC >Mature Secondary Structure MVTSFLITNDDGIDAPGIRALHKALSQVTSDRIVMVAPKHHQSGCGHQVNIRTVIPVEWR CCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEEEEEEC SETEVSVDSTPADCVRLGVNYLYDDINFVVSGVNSGCNMGSDIYPSGTIAAAREATIHRI CCCCEEECCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH PAIAFSHFKRNDWEIDWERAIQWTVMVLKKLLAEPPEEGTLWTVNFPHLEPDAPEPEMVF HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHH CRLCNRPLLTEFVKKENGYLYVGYDLNRKSDPGTDVDVCLSGNIAIAKARLW HHHCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEECCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]