| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475427
Identifier: 113475427
GI number: 113475427
Start: 2674587
End: 2675630
Strand: Reverse
Name: 113475427
Synonym: Tery_1755
Alternate gene names: NA
Gene position: 2675630-2674587 (Counterclockwise)
Preceding gene: 113475435
Following gene: 113475420
Centisome position: 34.52
GC content: 37.16
Gene sequence:
>1044_bases ATGCGAGCAATTTTATGTGGTTACTATGGAAAAGGAAATGGTGGAGATGAGGCATTGTTAGCATCTTTATTGCAGATGTT GCCCGATAATATTGAACCATTAGTTTTATCTGGCAACCCCTCCGAAACCAAACAACGCTACCAAGTAGAAGCGAGCGATC GCCTCAATGCATTTACCATCCTCCAAGCTATGAGAACTTCAGATATATTTATTTGGGGTGGTGGAAGTCTTATTCAAGAT GCTACCAGTATTGCTAGTCCTTTTTATTATGCCGGATTAATGGGAATTGCTCAAAAAATGGGCTTAAAAACTATTGCCTG GGCACAAGGAATTGGGCCTTTAAATCATTTAAGTACTCAATTTTTGGCAAAACAATGTTTAAAGCATTGCAATATTGTTA GCGTCAGGGATGCAACTTCAGCAGGAATAATTGCTAAATGGAACATTCCTTTTACTTTAGCCCCTGACCCGGTTTGGGCT TTAGAAACTTCCCCGGTCCCTGGTCTTTGGAGTTTACCTGCACCAAGAGTAGCGGTGAGCTTGAGACTCCATCCTCAACT TACTCCCCTACGTTTAGCAACTTTAACTAAAGCAATCATATCTTTTCAAAAGGCAACTCAAGCCTTTATTTTGTTATTAC CTTTTCAACCTATAAAAGATTTTAAAATTGCCGAATTTATTCATCAAAAATTACCTAATCATAGTAAAATTTTAACTTTA GAAAATCCTCAAGTTTTAAAGGGAGTTTTTAGAGGAGTGGAAATGGTAATAGGGATGCGTTTCCACAGTTTAATTATGGG CGCATCAGAAGAATGTCGCTGTTTTGCTATTAGTTATGATCCGAAAGTTAGCCAGTTAATGACTGATTTGGAAATGCCGG GATGGGAGTTATCAGAATTACCAGAAGATCCGAATTTAATTAGTAAAACTTGGATTGAGAATTATGTAAATGGGGATGTT TTATTATCAGATAGAATAGCTTTTTTTCGGGAGCGATCGCTCATTCATAAAGAGGTATTACATTCTGTTTTATTTGATTC ATAA
Upstream 100 bases:
>100_bases AGGTATTGATAAAGCGTGCATATTTAAAAAATCTGAATTTTCAAGTATTAATTTCTCCTTTTTTATCAGGTTAAATCAAA ATAGGAAATAATTCAAACAA
Downstream 100 bases:
>100_bases GTTATTTCAGTCATTAGTCATTTTAGTTATTAGTTATTAGTTATTAGTTATTAGTTATTAGTGTTTAGCAGTGCTCAGTA TTAGGGTTGAAATACTGAAG
Product: polysaccharide pyruvyl transferase
Products: NA
Alternate protein names: Polysaccharide Pyruvyl Transferase CsaB; Pyruvyl-Transferase; CsaB Protein; Polysaccharide Pyruvyl Transferase Csab; Polysaccharide Pyruvyl Transferase Superfamily; Polysaccharide Pyruvyl Transferase Family; Polysaccharide Pyruvyl Transferase Superfamily Protein; Polysaccharide Pyruvyl Transferase Family Protein; Glycosyl Transferase WecB/TagA/CpsF Family; Polysaccharide Pyruvyl-Transferase; WecB/TagA/CpsF Family Glycosyl Transferase
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MRAILCGYYGKGNGGDEALLASLLQMLPDNIEPLVLSGNPSETKQRYQVEASDRLNAFTILQAMRTSDIFIWGGGSLIQD ATSIASPFYYAGLMGIAQKMGLKTIAWAQGIGPLNHLSTQFLAKQCLKHCNIVSVRDATSAGIIAKWNIPFTLAPDPVWA LETSPVPGLWSLPAPRVAVSLRLHPQLTPLRLATLTKAIISFQKATQAFILLLPFQPIKDFKIAEFIHQKLPNHSKILTL ENPQVLKGVFRGVEMVIGMRFHSLIMGASEECRCFAISYDPKVSQLMTDLEMPGWELSELPEDPNLISKTWIENYVNGDV LLSDRIAFFRERSLIHKEVLHSVLFDS
Sequences:
>Translated_347_residues MRAILCGYYGKGNGGDEALLASLLQMLPDNIEPLVLSGNPSETKQRYQVEASDRLNAFTILQAMRTSDIFIWGGGSLIQD ATSIASPFYYAGLMGIAQKMGLKTIAWAQGIGPLNHLSTQFLAKQCLKHCNIVSVRDATSAGIIAKWNIPFTLAPDPVWA LETSPVPGLWSLPAPRVAVSLRLHPQLTPLRLATLTKAIISFQKATQAFILLLPFQPIKDFKIAEFIHQKLPNHSKILTL ENPQVLKGVFRGVEMVIGMRFHSLIMGASEECRCFAISYDPKVSQLMTDLEMPGWELSELPEDPNLISKTWIENYVNGDV LLSDRIAFFRERSLIHKEVLHSVLFDS >Mature_347_residues MRAILCGYYGKGNGGDEALLASLLQMLPDNIEPLVLSGNPSETKQRYQVEASDRLNAFTILQAMRTSDIFIWGGGSLIQD ATSIASPFYYAGLMGIAQKMGLKTIAWAQGIGPLNHLSTQFLAKQCLKHCNIVSVRDATSAGIIAKWNIPFTLAPDPVWA LETSPVPGLWSLPAPRVAVSLRLHPQLTPLRLATLTKAIISFQKATQAFILLLPFQPIKDFKIAEFIHQKLPNHSKILTL ENPQVLKGVFRGVEMVIGMRFHSLIMGASEECRCFAISYDPKVSQLMTDLEMPGWELSELPEDPNLISKTWIENYVNGDV LLSDRIAFFRERSLIHKEVLHSVLFDS
Specific function: Unknown
COG id: COG2327
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38544; Mature: 38544
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAILCGYYGKGNGGDEALLASLLQMLPDNIEPLVLSGNPSETKQRYQVEASDRLNAFTI CCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHEEECCCCCCHHHHH LQAMRTSDIFIWGGGSLIQDATSIASPFYYAGLMGIAQKMGLKTIAWAQGIGPLNHLSTQ HHHHHCCCEEEECCCHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHH FLAKQCLKHCNIVSVRDATSAGIIAKWNIPFTLAPDPVWALETSPVPGLWSLPAPRVAVS HHHHHHHHHCCEEEECCCCCCCEEEEECCCEEECCCCEEEEECCCCCCCCCCCCCCEEEE LRLHPQLTPLRLATLTKAIISFQKATQAFILLLPFQPIKDFKIAEFIHQKLPNHSKILTL EEECCCCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEE ENPQVLKGVFRGVEMVIGMRFHSLIMGASEECRCFAISYDPKVSQLMTDLEMPGWELSEL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCCCCCCHHHC PEDPNLISKTWIENYVNGDVLLSDRIAFFRERSLIHKEVLHSVLFDS CCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRAILCGYYGKGNGGDEALLASLLQMLPDNIEPLVLSGNPSETKQRYQVEASDRLNAFTI CCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHEEECCCCCCHHHHH LQAMRTSDIFIWGGGSLIQDATSIASPFYYAGLMGIAQKMGLKTIAWAQGIGPLNHLSTQ HHHHHCCCEEEECCCHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHH FLAKQCLKHCNIVSVRDATSAGIIAKWNIPFTLAPDPVWALETSPVPGLWSLPAPRVAVS HHHHHHHHHCCEEEECCCCCCCEEEEECCCEEECCCCEEEEECCCCCCCCCCCCCCEEEE LRLHPQLTPLRLATLTKAIISFQKATQAFILLLPFQPIKDFKIAEFIHQKLPNHSKILTL EEECCCCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEE ENPQVLKGVFRGVEMVIGMRFHSLIMGASEECRCFAISYDPKVSQLMTDLEMPGWELSEL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCCCCCCHHHC PEDPNLISKTWIENYVNGDVLLSDRIAFFRERSLIHKEVLHSVLFDS CCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA