| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475409
Identifier: 113475409
GI number: 113475409
Start: 2640871
End: 2641221
Strand: Reverse
Name: 113475409
Synonym: Tery_1735
Alternate gene names: NA
Gene position: 2641221-2640871 (Counterclockwise)
Preceding gene: 113475410
Following gene: 113475408
Centisome position: 34.08
GC content: 37.32
Gene sequence:
>351_bases ATGTTTGAATTTTTGGCTAGTGTTATTATTACACAAGGGATTTTAGATTGGGAGCCTGTAGGTTATAATACTAAGGCAAC AACGTTAATAAATATGAACACTATTGAAGGCCTGGGCAACAATTTGTGGAGGGCAGAAGTATTAAAGCAATACGATCAGG AGGCAGATGATGGAATGAAACAGGTCTATATGGTGGTGGAAATTGATTGTAATATTGGCAGGTTTGCTTCTCAATTAATT AGAAGACAAACTGGTCTTGGTGAGATTATTGCTGAAACAACGTTAGAAGGTAATAGGTTCATTTCTCCTCAAGGTTCTGA GGCTGGAATTTTGATGATATGCGATCGCTAA
Upstream 100 bases:
>100_bases AAAAAGATAAATTCACTTCTTAACTAATAGTTCAAAGTGAGTTAAGCTAACAACAGTTCTTCAAGGAAGTCTGTTTAATT AGTTATTTAAGGCAAAGTTT
Downstream 100 bases:
>100_bases TATATTAAGGATGTATACTATCGCTAATATATTAAGGATGTATACTATCCCTAATATATTAAGGATGTATACTATTTAGC TCGAAAAATTTTCAATTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MFEFLASVIITQGILDWEPVGYNTKATTLINMNTIEGLGNNLWRAEVLKQYDQEADDGMKQVYMVVEIDCNIGRFASQLI RRQTGLGEIIAETTLEGNRFISPQGSEAGILMICDR
Sequences:
>Translated_116_residues MFEFLASVIITQGILDWEPVGYNTKATTLINMNTIEGLGNNLWRAEVLKQYDQEADDGMKQVYMVVEIDCNIGRFASQLI RRQTGLGEIIAETTLEGNRFISPQGSEAGILMICDR >Mature_116_residues MFEFLASVIITQGILDWEPVGYNTKATTLINMNTIEGLGNNLWRAEVLKQYDQEADDGMKQVYMVVEIDCNIGRFASQLI RRQTGLGEIIAETTLEGNRFISPQGSEAGILMICDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13004; Mature: 13004
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEFLASVIITQGILDWEPVGYNTKATTLINMNTIEGLGNNLWRAEVLKQYDQEADDGMK CHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHCCCCHHHHHHHHHHHCCCCCHHH QVYMVVEIDCNIGRFASQLIRRQTGLGEIIAETTLEGNRFISPQGSEAGILMICDR EEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHCCCCCEEECCCCCCCCEEEEECC >Mature Secondary Structure MFEFLASVIITQGILDWEPVGYNTKATTLINMNTIEGLGNNLWRAEVLKQYDQEADDGMK CHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHCCCCHHHHHHHHHHHCCCCCHHH QVYMVVEIDCNIGRFASQLIRRQTGLGEIIAETTLEGNRFISPQGSEAGILMICDR EEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHCCCCCEEECCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA