Click here to switch to the map view.

The map label for this gene is cotSA [H]

Identifier: 113475410

GI number: 113475410

Start: 2643845

End: 2645032

Strand: Reverse

Name: cotSA [H]

Synonym: Tery_1737

Alternate gene names: 113475410

Gene position: 2645032-2643845 (Counterclockwise)

Preceding gene: 113475411

Following gene: 113475409

Centisome position: 34.13

GC content: 38.64

Gene sequence:

>1188_bases
GTGAAAATACTACTAGTCTGCACAGAAAAATTGCCAGTGCCTTGTATCCGAGGCGGGGCTATTCAGACATATATAGATGG
TATTCTACCTTTCCTGAAGCGAGATCATGAAGTTACAGTATTCTCTGTAGCTGATCCAGAACTACCAGATCAGGAAATTA
GGGACAATATTCTCTATAAACGTTCTAGTAGAAAAACTTCAGAGGAATACTATCACGCTGTAACCAATTTTGTAGCAGGA
CGAGAGTTTGATTGGATAGTAATTTACAATCGTCCTAAGTATTTACCAATGGTGGCTGAAGTTGCACCAAACAGTCGTTT
TATACTGAGTATGCACAATGAAATGTTCCATGCTAAGAAGATTGAACCTGAAGAAGCAATTCTATGTTTGGAACGAGTGG
AAAAAGTGGTGACAGTTAGTAAGTTTATTGCTGATGGAATAGCTAAATTATTTCCAGGATATGAACATAAGTTAACACCT
GTATATGCAGGAGTAGACCTAAAGCTCTTTCAGCCTAGGTGGATAGAAGGATTAGAAGGGAAACGAAAAGAAAAGTTGGC
GGCTCTGGGTTTAGAAGATAAACAAGTGATCCTTTATGTGGGCAGGTTAACAGATAAAAAAGGGCCTCATTTGTTGATAT
CTGCTATGACCAAAGTTATCAAGAAACACCCATCTGCTGTATTATTGCTAGTGGGTAGTAAATGGTATGGTAATAATGAG
GAAAACGATTATGTCCGTGAAATTAAGGTCAAGGCTGAACAATTGGGAGGAGCAGTTCAGATGACTGGTTTTATTCCCCC
ATATGAAGTTGCAGATTATTTCTTATTAGGTGATGTATTTGTATGTGCATCTCAATGGGAAGAGCCTCTAGCTAGGGTGC
ATTATGAGGCTATGGCAACTGGGTTATGTACTATAACTACTGGTAGGGGAGGAAACCCGGAAGTAATTATTCCTGGTAAG
AATGGTATTGTGATCACAGACTATGAAAATTCGGGTGCATTTGCAGATTGTATAGATTATTTGTTGTCTATGCCAAACAA
GAGAGAAGAAATGGGGAAAAGAGGGCGTGAGCTAGCGGAGCTATATTACAGTTGGTCAAGGGTGGCTTGGGATATTTTAA
GTATTATTAATGATTCAACATCAATGTATTCATCTTCATCTTTAGAAAGATTCGGACAAACAGGATAA

Upstream 100 bases:

>100_bases
TTGAAAAAAAATAATACGATTATTTAGATTTATTCTATCATAAAAAATATTTTAAAATGCTTTATACTTATGAATGACTT
ATTGAATTAAAATTGATAAC

Downstream 100 bases:

>100_bases
GGAATGAAAACAAAATAAAACTAAAGAAAGTTAATTCCCCCCAATGATTTTCCTAAGTACAAACTACAAATTTCCGGTTT
TATTTAATTTACTTTCCTAA

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MKILLVCTEKLPVPCIRGGAIQTYIDGILPFLKRDHEVTVFSVADPELPDQEIRDNILYKRSSRKTSEEYYHAVTNFVAG
REFDWIVIYNRPKYLPMVAEVAPNSRFILSMHNEMFHAKKIEPEEAILCLERVEKVVTVSKFIADGIAKLFPGYEHKLTP
VYAGVDLKLFQPRWIEGLEGKRKEKLAALGLEDKQVILYVGRLTDKKGPHLLISAMTKVIKKHPSAVLLLVGSKWYGNNE
ENDYVREIKVKAEQLGGAVQMTGFIPPYEVADYFLLGDVFVCASQWEEPLARVHYEAMATGLCTITTGRGGNPEVIIPGK
NGIVITDYENSGAFADCIDYLLSMPNKREEMGKRGRELAELYYSWSRVAWDILSIINDSTSMYSSSSLERFGQTG

Sequences:

>Translated_395_residues
MKILLVCTEKLPVPCIRGGAIQTYIDGILPFLKRDHEVTVFSVADPELPDQEIRDNILYKRSSRKTSEEYYHAVTNFVAG
REFDWIVIYNRPKYLPMVAEVAPNSRFILSMHNEMFHAKKIEPEEAILCLERVEKVVTVSKFIADGIAKLFPGYEHKLTP
VYAGVDLKLFQPRWIEGLEGKRKEKLAALGLEDKQVILYVGRLTDKKGPHLLISAMTKVIKKHPSAVLLLVGSKWYGNNE
ENDYVREIKVKAEQLGGAVQMTGFIPPYEVADYFLLGDVFVCASQWEEPLARVHYEAMATGLCTITTGRGGNPEVIIPGK
NGIVITDYENSGAFADCIDYLLSMPNKREEMGKRGRELAELYYSWSRVAWDILSIINDSTSMYSSSSLERFGQTG
>Mature_395_residues
MKILLVCTEKLPVPCIRGGAIQTYIDGILPFLKRDHEVTVFSVADPELPDQEIRDNILYKRSSRKTSEEYYHAVTNFVAG
REFDWIVIYNRPKYLPMVAEVAPNSRFILSMHNEMFHAKKIEPEEAILCLERVEKVVTVSKFIADGIAKLFPGYEHKLTP
VYAGVDLKLFQPRWIEGLEGKRKEKLAALGLEDKQVILYVGRLTDKKGPHLLISAMTKVIKKHPSAVLLLVGSKWYGNNE
ENDYVREIKVKAEQLGGAVQMTGFIPPYEVADYFLLGDVFVCASQWEEPLARVHYEAMATGLCTITTGRGGNPEVIIPGK
NGIVITDYENSGAFADCIDYLLSMPNKREEMGKRGRELAELYYSWSRVAWDILSIINDSTSMYSSSSLERFGQTG

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 44628; Mature: 44628

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILLVCTEKLPVPCIRGGAIQTYIDGILPFLKRDHEVTVFSVADPELPDQEIRDNILYK
CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHEE
RSSRKTSEEYYHAVTNFVAGREFDWIVIYNRPKYLPMVAEVAPNSRFILSMHNEMFHAKK
CCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHCCCCCCEEEEEECHHHHHHHC
IEPEEAILCLERVEKVVTVSKFIADGIAKLFPGYEHKLTPVYAGVDLKLFQPRWIEGLEG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEECCHHHCCCCC
KRKEKLAALGLEDKQVILYVGRLTDKKGPHLLISAMTKVIKKHPSAVLLLVGSKWYGNNE
CHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCC
ENDYVREIKVKAEQLGGAVQMTGFIPPYEVADYFLLGDVFVCASQWEEPLARVHYEAMAT
CCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLCTITTGRGGNPEVIIPGKNGIVITDYENSGAFADCIDYLLSMPNKREEMGKRGRELAE
CEEEEEECCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
LYYSWSRVAWDILSIINDSTSMYSSSSLERFGQTG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKILLVCTEKLPVPCIRGGAIQTYIDGILPFLKRDHEVTVFSVADPELPDQEIRDNILYK
CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHEE
RSSRKTSEEYYHAVTNFVAGREFDWIVIYNRPKYLPMVAEVAPNSRFILSMHNEMFHAKK
CCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHCCCCCCEEEEEECHHHHHHHC
IEPEEAILCLERVEKVVTVSKFIADGIAKLFPGYEHKLTPVYAGVDLKLFQPRWIEGLEG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEECCHHHCCCCC
KRKEKLAALGLEDKQVILYVGRLTDKKGPHLLISAMTKVIKKHPSAVLLLVGSKWYGNNE
CHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCC
ENDYVREIKVKAEQLGGAVQMTGFIPPYEVADYFLLGDVFVCASQWEEPLARVHYEAMAT
CCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLCTITTGRGGNPEVIIPGKNGIVITDYENSGAFADCIDYLLSMPNKREEMGKRGRELAE
CEEEEEECCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
LYYSWSRVAWDILSIINDSTSMYSSSSLERFGQTG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7545510; 9387221; 9384377; 10234840 [H]