| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is pkn1 [H]
Identifier: 113475405
GI number: 113475405
Start: 2634407
End: 2637040
Strand: Reverse
Name: pkn1 [H]
Synonym: Tery_1731
Alternate gene names: 113475405
Gene position: 2637040-2634407 (Counterclockwise)
Preceding gene: 113475406
Following gene: 113475404
Centisome position: 34.03
GC content: 42.6
Gene sequence:
>2634_bases ATGAGTAGTTCCAGTTTTGAGCACACCATTAAACTTTTGATAGACCGACTCGCTCGAACCGGAATTTTAGAAGGTCTGGA ACTCAGCGATGAAAATATTGCTGATAGTATTTGGTTGGCTTTACAAATGGGTACGGTGAAGACTCCACAAAAGCCGAAGC CAAAATATGAACAGCAACCGGAACAACTGCCGATAATTTTTGAAGACAGTGATCCTCAACCTGTTACCGAGAGAGAACCT CAAGTATCAGTGATCACGGAGGAATCAATAGACCAAACCCCCGAAAAACCTCCAGTTAAAGGTTTGCCATTCCAAACACC CGCGGCTCCAGCTCTCCAGAATGTACTGGAGTTAGGTCGTGCTTTGCGTCCTCTGATGCGGAAAGTTCCCTCTCTCTCCA GAAAAACACTAGACGAAGAAGAAACTGTTAATGTTATTGCCGAGCAGGATATCTGGTTGCCCGTTACTAAACCAGAACCC GAACGCTGGCTTGACTTAGAACTGGTGGTAGAAGAGTCGAGTTCCGCTTTTATTTGGAGAGAGACGGTGAATGAAATGCA AGAAGTCTTGGAAACTCAGGGAGCATTTAAAAATGTCCGAGTCTGGAGTTTGCTCAGTTCAAATACTAAAAAATTAAAAT TAGTCCGGCGACATAACAGCGGTAAACCAAAGCAACGTCAACATAGTCATCGAGAATTAATTCATTCTAACCAGCGGGGA GTAGTTATTTTTGTCAGTGACTGTACTTCTAAAATTTGGCAAAATGGTACTGTTCACCACTGGTTAAAAGTTTGGTCAGA AAAAAACCCCACAACAATATTACAGTTATTCCCTGAATATCTTTGGGATAGCACTCAACTGGGAGTGGGAAGTAAATTTT TTGGTACTGCTGTTGCACCAGGAGTTCCTAACCCCCGGTTGGTTTTGGAAAATTTACCTCCCTGGATACCTATAAACTGG AAGAATGCTTTGGTTTTACCTGTCATTCTGCCTGAACCTGAACTTTTGAAAAGTTGGTGTCGGATAGTGTCCGGAGCTAG TAACTCACGAGTACCTATATTTTTATTTGATTTATCTTTTGTTGAAAAGCAATTTTGCCAAAAACAAGAAGACTCTCCAC CAGAGCTACCCACCCCTAAAAAAGAAATTTCACCTACAACTAGGGTGAGAAAATTTCTGGCAACAACTTCTATTACTGCT CAACGACTCGCAGGGATGATGGCGGCGGCTCCGGTGAATTTGTCTGTGGTTAACTTAATTCGCAAAACTCTCTTAAAGGA AGCTACCACCGTTCATGTGGCGGAAGTTTATATGGGAGGTTTGCTTGCTCCAACTGACTCTAAGGATGATCAACCAACTT ATGAATTTCTTCCTGGTGTCCGAAAAGAGTTGAACCAGGCAATGGGGCGCAACGAAACTACGGCTGTTCTGGATGCTGTT TCTCGTTACATCGCTGAAAAAATTGACCGACCTATTCGTAGTTTTCGAGCTTTGTTGACCTTATTGCCTCAATATGAGGA GGAAGACCGGGAGCAAGTCTTACCTTTTGCTCAAGTTGCTGTTGATGTATTGGAAAATTTAGGTGGAGAATATGCTGAGT TTGCTGAGAAGGTTGCCCAGAAAATTCGACCTGTTTCTGTTCCTCCCATTTTTGAAACTCCCGAGTCAGAAGTCAGATCA GAACCTCAAATTCAAACTGATACTTTTGACGTTGCTTTCATTGAAGTGCAGGAAACTGTAACCTTTGAGTTTGATCTAGC AAGGTTGGAAAAAAGACGTTCAGAATTATTGAGATTATTTGGATATCGATGGGCTATCAAAAAACAACGCCGACAAGTTA CAGGTATTGTGGAAGACTTGGGGAATGGAATTAAACTTGAAATGGTGGAAATTCCCCCAGGAAAGTTTCTTATGGGCTCC CCAGAAGATGAATTGGAACGAGAAAGTCGTGAAGGTCCTCAACATCAGGTGAATATTTCAGCTTTTCTCATGGGTCGCTA CCCTGTTACTCAAGGTCAGTGGAAAGCCATTGTTGATAATGTGCCAAAAATTGAACGTGACCTTAAGTCTAACCCTTCAT ATTTTAAAGGAAATGATCGACCTGTAGAAAGAGTGTCTTGGTATGATGCAGTAGAGTTTTGTGCCAGACTATCCAAATAT ACAGGCAGAAACTATGGGCTTCCCAGTGAAGCTCAATGGGAATATGCTTGTCGTGCAGGAACAACTACACCCTTTCATTT TGGGGAAACTATTACTACAGACCTGGCCAATTATGATGGCAATTATACTTATGGCCAAGGGACAAAAGGCAAGTATAGAG AAGAAACAACTCCTGTTGGTAGTTTTGAAGTGGCCAATCCTTTTGGCTTATACGATATGCACGGGAATGTTTACGAATGG TGCGAAGATGATATGCATGATAATTATGAGGGTGCACCCAATGATGGTAGTCCATGGCTATCAGGTAATCAAAATACTAC AAAATATTCTACAAAAGTATTACGGGGCGGCTCCTGGCTCAACTATCCTTGGTGGTGTCGCTCTGCGTACCGCTACGACT TTAGCTCGGACGGGGCGGTCATCATCAATTTTGGTTTTCGTCTTGTGAGTTTCCCCCCCAGGACTCTTGAATAG
Upstream 100 bases:
>100_bases GGGTCGTATCCCTGCTACCGAAGGTAAAAGTTTTTTTGACGACGAATTAGTACAACAACTTTTACAAGACTTAGGAAGAG CTGAGGCTGAAGATTAAAAT
Downstream 100 bases:
>100_bases CCCTTTGCTCTTTTGCCCTTTTGCCCTTTTCAGTCTCGCCTCTGGCGAGTCGAAATTTTTTTTGAAATTGAGAAAATATG GCCCAAATATAAAAATATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 877; Mature: 876
Protein sequence:
>877_residues MSSSSFEHTIKLLIDRLARTGILEGLELSDENIADSIWLALQMGTVKTPQKPKPKYEQQPEQLPIIFEDSDPQPVTEREP QVSVITEESIDQTPEKPPVKGLPFQTPAAPALQNVLELGRALRPLMRKVPSLSRKTLDEEETVNVIAEQDIWLPVTKPEP ERWLDLELVVEESSSAFIWRETVNEMQEVLETQGAFKNVRVWSLLSSNTKKLKLVRRHNSGKPKQRQHSHRELIHSNQRG VVIFVSDCTSKIWQNGTVHHWLKVWSEKNPTTILQLFPEYLWDSTQLGVGSKFFGTAVAPGVPNPRLVLENLPPWIPINW KNALVLPVILPEPELLKSWCRIVSGASNSRVPIFLFDLSFVEKQFCQKQEDSPPELPTPKKEISPTTRVRKFLATTSITA QRLAGMMAAAPVNLSVVNLIRKTLLKEATTVHVAEVYMGGLLAPTDSKDDQPTYEFLPGVRKELNQAMGRNETTAVLDAV SRYIAEKIDRPIRSFRALLTLLPQYEEEDREQVLPFAQVAVDVLENLGGEYAEFAEKVAQKIRPVSVPPIFETPESEVRS EPQIQTDTFDVAFIEVQETVTFEFDLARLEKRRSELLRLFGYRWAIKKQRRQVTGIVEDLGNGIKLEMVEIPPGKFLMGS PEDELERESREGPQHQVNISAFLMGRYPVTQGQWKAIVDNVPKIERDLKSNPSYFKGNDRPVERVSWYDAVEFCARLSKY TGRNYGLPSEAQWEYACRAGTTTPFHFGETITTDLANYDGNYTYGQGTKGKYREETTPVGSFEVANPFGLYDMHGNVYEW CEDDMHDNYEGAPNDGSPWLSGNQNTTKYSTKVLRGGSWLNYPWWCRSAYRYDFSSDGAVIINFGFRLVSFPPRTLE
Sequences:
>Translated_877_residues MSSSSFEHTIKLLIDRLARTGILEGLELSDENIADSIWLALQMGTVKTPQKPKPKYEQQPEQLPIIFEDSDPQPVTEREP QVSVITEESIDQTPEKPPVKGLPFQTPAAPALQNVLELGRALRPLMRKVPSLSRKTLDEEETVNVIAEQDIWLPVTKPEP ERWLDLELVVEESSSAFIWRETVNEMQEVLETQGAFKNVRVWSLLSSNTKKLKLVRRHNSGKPKQRQHSHRELIHSNQRG VVIFVSDCTSKIWQNGTVHHWLKVWSEKNPTTILQLFPEYLWDSTQLGVGSKFFGTAVAPGVPNPRLVLENLPPWIPINW KNALVLPVILPEPELLKSWCRIVSGASNSRVPIFLFDLSFVEKQFCQKQEDSPPELPTPKKEISPTTRVRKFLATTSITA QRLAGMMAAAPVNLSVVNLIRKTLLKEATTVHVAEVYMGGLLAPTDSKDDQPTYEFLPGVRKELNQAMGRNETTAVLDAV SRYIAEKIDRPIRSFRALLTLLPQYEEEDREQVLPFAQVAVDVLENLGGEYAEFAEKVAQKIRPVSVPPIFETPESEVRS EPQIQTDTFDVAFIEVQETVTFEFDLARLEKRRSELLRLFGYRWAIKKQRRQVTGIVEDLGNGIKLEMVEIPPGKFLMGS PEDELERESREGPQHQVNISAFLMGRYPVTQGQWKAIVDNVPKIERDLKSNPSYFKGNDRPVERVSWYDAVEFCARLSKY TGRNYGLPSEAQWEYACRAGTTTPFHFGETITTDLANYDGNYTYGQGTKGKYREETTPVGSFEVANPFGLYDMHGNVYEW CEDDMHDNYEGAPNDGSPWLSGNQNTTKYSTKVLRGGSWLNYPWWCRSAYRYDFSSDGAVIINFGFRLVSFPPRTLE >Mature_876_residues SSSSFEHTIKLLIDRLARTGILEGLELSDENIADSIWLALQMGTVKTPQKPKPKYEQQPEQLPIIFEDSDPQPVTEREPQ VSVITEESIDQTPEKPPVKGLPFQTPAAPALQNVLELGRALRPLMRKVPSLSRKTLDEEETVNVIAEQDIWLPVTKPEPE RWLDLELVVEESSSAFIWRETVNEMQEVLETQGAFKNVRVWSLLSSNTKKLKLVRRHNSGKPKQRQHSHRELIHSNQRGV VIFVSDCTSKIWQNGTVHHWLKVWSEKNPTTILQLFPEYLWDSTQLGVGSKFFGTAVAPGVPNPRLVLENLPPWIPINWK NALVLPVILPEPELLKSWCRIVSGASNSRVPIFLFDLSFVEKQFCQKQEDSPPELPTPKKEISPTTRVRKFLATTSITAQ RLAGMMAAAPVNLSVVNLIRKTLLKEATTVHVAEVYMGGLLAPTDSKDDQPTYEFLPGVRKELNQAMGRNETTAVLDAVS RYIAEKIDRPIRSFRALLTLLPQYEEEDREQVLPFAQVAVDVLENLGGEYAEFAEKVAQKIRPVSVPPIFETPESEVRSE PQIQTDTFDVAFIEVQETVTFEFDLARLEKRRSELLRLFGYRWAIKKQRRQVTGIVEDLGNGIKLEMVEIPPGKFLMGSP EDELERESREGPQHQVNISAFLMGRYPVTQGQWKAIVDNVPKIERDLKSNPSYFKGNDRPVERVSWYDAVEFCARLSKYT GRNYGLPSEAQWEYACRAGTTTPFHFGETITTDLANYDGNYTYGQGTKGKYREETTPVGSFEVANPFGLYDMHGNVYEWC EDDMHDNYEGAPNDGSPWLSGNQNTTKYSTKVLRGGSWLNYPWWCRSAYRYDFSSDGAVIINFGFRLVSFPPRTLE
Specific function: Together with the serine/threonine kinase pknD, may play a role in the specific interactions with host proteins during intracellular growth [H]
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
Organism=Homo sapiens, GI257470975, Length=272, Percent_Identity=29.4117647058824, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI38202250, Length=296, Percent_Identity=27.3648648648649, Blast_Score=74, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016187 - InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017442 - InterPro: IPR005532 [H]
Pfam domain/function: PF03781 DUF323; PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 99750; Mature: 99619
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSSFEHTIKLLIDRLARTGILEGLELSDENIADSIWLALQMGTVKTPQKPKPKYEQQP CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEEEECCCCCCCCCCCCCCCCC EQLPIIFEDSDPQPVTEREPQVSVITEESIDQTPEKPPVKGLPFQTPAAPALQNVLELGR CCCCEEEECCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH ALRPLMRKVPSLSRKTLDEEETVNVIAEQDIWLPVTKPEPERWLDLELVVEESSSAFIWR HHHHHHHHCCCHHHHCCCCHHHHHEEECCCEEEECCCCCCCHHEEEEEEEECCCCCEEEH ETVNEMQEVLETQGAFKNVRVWSLLSSNTKKLKLVRRHNSGKPKQRQHSHRELIHSNQRG HHHHHHHHHHHHCCCHHCCEEEHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC VVIFVSDCTSKIWQNGTVHHWLKVWSEKNPTTILQLFPEYLWDSTQLGVGSKFFGTAVAP EEEEEECHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCC GVPNPRLVLENLPPWIPINWKNALVLPVILPEPELLKSWCRIVSGASNSRVPIFLFDLSF CCCCCCEECCCCCCCEEECCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEECHHH VEKQFCQKQEDSPPELPTPKKEISPTTRVRKFLATTSITAQRLAGMMAAAPVNLSVVNLI HHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH RKTLLKEATTVHVAEVYMGGLLAPTDSKDDQPTYEFLPGVRKELNQAMGRNETTAVLDAV HHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH SRYIAEKIDRPIRSFRALLTLLPQYEEEDREQVLPFAQVAVDVLENLGGEYAEFAEKVAQ HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHH KIRPVSVPPIFETPESEVRSEPQIQTDTFDVAFIEVQETVTFEFDLARLEKRRSELLRLF HCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHH GYRWAIKKQRRQVTGIVEDLGNGIKLEMVEIPPGKFLMGSPEDELERESREGPQHQVNIS HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCHHHHHHHHHCCCCEEEEEE AFLMGRYPVTQGQWKAIVDNVPKIERDLKSNPSYFKGNDRPVERVSWYDAVEFCARLSKY EEEEECCCCCCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH TGRNYGLPSEAQWEYACRAGTTTPFHFGETITTDLANYDGNYTYGQGTKGKYREETTPVG CCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCCC SFEVANPFGLYDMHGNVYEWCEDDMHDNYEGAPNDGSPWLSGNQNTTKYSTKVLRGGSWL CEECCCCCCEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC NYPWWCRSAYRYDFSSDGAVIINFGFRLVSFPPRTLE CCCHHHHHHHCCCCCCCCEEEEEECCEEEECCCCCCC >Mature Secondary Structure SSSSFEHTIKLLIDRLARTGILEGLELSDENIADSIWLALQMGTVKTPQKPKPKYEQQP CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEEEECCCCCCCCCCCCCCCCC EQLPIIFEDSDPQPVTEREPQVSVITEESIDQTPEKPPVKGLPFQTPAAPALQNVLELGR CCCCEEEECCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH ALRPLMRKVPSLSRKTLDEEETVNVIAEQDIWLPVTKPEPERWLDLELVVEESSSAFIWR HHHHHHHHCCCHHHHCCCCHHHHHEEECCCEEEECCCCCCCHHEEEEEEEECCCCCEEEH ETVNEMQEVLETQGAFKNVRVWSLLSSNTKKLKLVRRHNSGKPKQRQHSHRELIHSNQRG HHHHHHHHHHHHCCCHHCCEEEHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC VVIFVSDCTSKIWQNGTVHHWLKVWSEKNPTTILQLFPEYLWDSTQLGVGSKFFGTAVAP EEEEEECHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCC GVPNPRLVLENLPPWIPINWKNALVLPVILPEPELLKSWCRIVSGASNSRVPIFLFDLSF CCCCCCEECCCCCCCEEECCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEECHHH VEKQFCQKQEDSPPELPTPKKEISPTTRVRKFLATTSITAQRLAGMMAAAPVNLSVVNLI HHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH RKTLLKEATTVHVAEVYMGGLLAPTDSKDDQPTYEFLPGVRKELNQAMGRNETTAVLDAV HHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH SRYIAEKIDRPIRSFRALLTLLPQYEEEDREQVLPFAQVAVDVLENLGGEYAEFAEKVAQ HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHH KIRPVSVPPIFETPESEVRSEPQIQTDTFDVAFIEVQETVTFEFDLARLEKRRSELLRLF HCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHH GYRWAIKKQRRQVTGIVEDLGNGIKLEMVEIPPGKFLMGSPEDELERESREGPQHQVNIS HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCHHHHHHHHHCCCCEEEEEE AFLMGRYPVTQGQWKAIVDNVPKIERDLKSNPSYFKGNDRPVERVSWYDAVEFCARLSKY EEEEECCCCCCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH TGRNYGLPSEAQWEYACRAGTTTPFHFGETITTDLANYDGNYTYGQGTKGKYREETTPVG CCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCCC SFEVANPFGLYDMHGNVYEWCEDDMHDNYEGAPNDGSPWLSGNQNTTKYSTKVLRGGSWL CEECCCCCCEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC NYPWWCRSAYRYDFSSDGAVIINFGFRLVSFPPRTLE CCCHHHHHHHCCCCCCCCEEEEEECCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12682364 [H]