| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475404
Identifier: 113475404
GI number: 113475404
Start: 2633969
End: 2634310
Strand: Reverse
Name: 113475404
Synonym: Tery_1730
Alternate gene names: NA
Gene position: 2634310-2633969 (Counterclockwise)
Preceding gene: 113475405
Following gene: 113475403
Centisome position: 33.99
GC content: 33.63
Gene sequence:
>342_bases ATGAATGAATTACCAATTATTCAAAAGACCTATGATTTTATTAAATGGTATGTCCCAGTATTAAATCGTTTGCCAAGGAA TTATCGTCTTGGTTTAGGAACGCGGATAATTAATCATCTTTATGATTTGCTGGAAAATCTGATTCGTGCCCGTTTTAGCA CCAGTGAAAAATTAGAGATTTTGCAAAACCTGAACATTAAACTTGATGTTATTCGGCACCAAACTCGCCTACTCTCAGAT TTTGAATTAATTTCCAGCGATCGCTACAAATATATAAATATACAGATCAATGGAATAGGATCTGACTTAGGTAGTTGGAC TAAAAACTTATCTGAACCCTAA
Upstream 100 bases:
>100_bases ATAGCCCTTTGCTCTTTTGCCCTTTTGCCCTTTTCAGTCTCGCCTCTGGCGAGTCGAAATTTTTTTTGAAATTGAGAAAA TATGGCCCAAATATAAAAAT
Downstream 100 bases:
>100_bases TAATCAAACTTAAAACAAAATCCAATGAAACGTCATGGAAACCTTTGGCCCCAAATTGTAGCCTGGAAAAACTTGTTTTT AGCCGCTCGTTACGCTCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MNELPIIQKTYDFIKWYVPVLNRLPRNYRLGLGTRIINHLYDLLENLIRARFSTSEKLEILQNLNIKLDVIRHQTRLLSD FELISSDRYKYINIQINGIGSDLGSWTKNLSEP
Sequences:
>Translated_113_residues MNELPIIQKTYDFIKWYVPVLNRLPRNYRLGLGTRIINHLYDLLENLIRARFSTSEKLEILQNLNIKLDVIRHQTRLLSD FELISSDRYKYINIQINGIGSDLGSWTKNLSEP >Mature_113_residues MNELPIIQKTYDFIKWYVPVLNRLPRNYRLGLGTRIINHLYDLLENLIRARFSTSEKLEILQNLNIKLDVIRHQTRLLSD FELISSDRYKYINIQINGIGSDLGSWTKNLSEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13376; Mature: 13376
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNELPIIQKTYDFIKWYVPVLNRLPRNYRLGLGTRIINHLYDLLENLIRARFSTSEKLEI CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LQNLNIKLDVIRHQTRLLSDFELISSDRYKYINIQINGIGSDLGSWTKNLSEP HHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHCCCCC >Mature Secondary Structure MNELPIIQKTYDFIKWYVPVLNRLPRNYRLGLGTRIINHLYDLLENLIRARFSTSEKLEI CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LQNLNIKLDVIRHQTRLLSDFELISSDRYKYINIQINGIGSDLGSWTKNLSEP HHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA