| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113474710
Identifier: 113474710
GI number: 113474710
Start: 1419747
End: 1419899
Strand: Reverse
Name: 113474710
Synonym: Tery_0897
Alternate gene names: NA
Gene position: 1419899-1419747 (Counterclockwise)
Preceding gene: 113474711
Following gene: 113474709
Centisome position: 18.32
GC content: 28.1
Gene sequence:
>153_bases ATGGAATTATCAAAATTATTATTTTTTGCAGATCATCCTCCTCCTCATTTTCATGCAATTTATGGAAAATATAACCCTCT ATTTAATCTAGAAACCTGGGAAATTATTGAAGGTGATTTAGCAAATAGAGCAACAAAAATAGTAATTGAATAG
Upstream 100 bases:
>100_bases ATTACAGGAAGCAATGGTAATTTATGAGCAAGTAATAATATAATTATTTTTGGGAATTTGCTTTTGAGAATCAAACCAAT GCCTGAAGTTTCCAGATTTT
Downstream 100 bases:
>100_bases GCATCAATATATCAAACAGAATTATTGCAAAGAATACCCAAGAATTTAGAAAATTACCACCATAAAAATAAATTATCGAA TAAAAATTATGCTTTATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 50; Mature: 50
Protein sequence:
>50_residues MELSKLLFFADHPPPHFHAIYGKYNPLFNLETWEIIEGDLANRATKIVIE
Sequences:
>Translated_50_residues MELSKLLFFADHPPPHFHAIYGKYNPLFNLETWEIIEGDLANRATKIVIE >Mature_50_residues MELSKLLFFADHPPPHFHAIYGKYNPLFNLETWEIIEGDLANRATKIVIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5841; Mature: 5841
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELSKLLFFADHPPPHFHAIYGKYNPLFNLETWEIIEGDLANRATKIVIE CCCCCEEEEECCCCCCEEEEECCCCCEECCCCEEEECCCCCCCEEEEEEC >Mature Secondary Structure MELSKLLFFADHPPPHFHAIYGKYNPLFNLETWEIIEGDLANRATKIVIE CCCCCEEEEECCCCCCEEEEECCCCCEECCCCEEEECCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA