| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is mglB [H]
Identifier: 113474630
GI number: 113474630
Start: 1269287
End: 1270315
Strand: Reverse
Name: mglB [H]
Synonym: Tery_0801
Alternate gene names: 113474630
Gene position: 1270315-1269287 (Counterclockwise)
Preceding gene: 113474633
Following gene: 113474629
Centisome position: 16.39
GC content: 30.13
Gene sequence:
>1029_bases ATGAAAAAGAGTTTATTCATAGCTTCAATTTTAGCATCTCTGTTATTTATAGGTTGTACAGCAAATACTAGTAATAACAA GGAAAATTTAATTAAGATAGGTGTCACTATTTACAAATATGATGATAACTTTATGTCTTATGTACGTCGTTATATTGAAT CAAGTGCTAATGCTAAAGCAAGATTATTTATTAATGATTCACAAAATAATCAAGCCAAGCAACTTGAGCAAATTGATACC ATGATTGCTAAGGGAGTCAAAGCTTTAGCAATTAACTTAGTAGATCCTAAGTCAGCTATAACAGTAATAGCAAAAGCTAA AAAAGCAAATTTACCTGTGATTTTCTTCAATAAAGAGCCAGAATTAGAACTTTTAAATAGTTATGAAAAGAGTTGGTATG TAGGTACTAATTCTCAAGAATCTGGAATTATACAAGGTACAATAATTACTAATTTATGGAATAAAAATAAAGAACAATGG GATCTGAATCAAGATGGAAAAATTCAATATGTTTTATTAAAAGGTGAACCAGGACATCCAGATGCCGAAGCACGAACTAA ATATGTTATTGATGAGGTTAAAAAGGCAGGTATTGAGGTAGAAAAATTAGCAATTGATACAGCTATGTGGGATGCTACAA AAGCTGCTAATAAAATGGATGTCTGGATATCTAAGTATGGTAATAAAATTGAGTTAGTAATTGCTAATAATGATGCTATG GCTTTAGGAGCTTTATCATCTTTAGAAAAAGCTGGATATTTTAAAGATAACAAATTAGTTCCAATAGTGGGAGTTGATGC TATACCTGAAGTGTTAATAAAAATTCGAGAAGGAAAAATTGTTGGTACTGTTTTAAATGATGCTAAGAATCAGGGTAAGG CTACATTTGATTTGGCTTTTAATGCTGCTTTAGGTAAAGATATTTTGGCAGATACTCAATGGAAATTAGATGTTAATAAA GCAGTCTTAGTTCCTTATGTTTCTATAACAAAAGATAATTTGGGTGTAGCAGAAGATGCTTATAATTAG
Upstream 100 bases:
>100_bases CATATATAGGAGTAATAAATAGTGTCAATTTTATAATTTAAAATTTAAAGCCATGAAAAAAATTGATAATAATAGTAATT ATAATTTAGGAATTTTTGTG
Downstream 100 bases:
>100_bases ACTTCTGTTCTAGGTAAAGTGTGGATTATTATCAGTAGTTACTTTACTAAAAAATTCACACAAGTTTAACTGCTTGTTTG TTTTAATTATCAGAATAAAT
Product: putative galactoside ABC transporter
Products: ADP; phosphate; beta-D-galactose [Cytoplasm] [C]
Alternate protein names: GBP; D-galactose/ D-glucose-binding protein; GGBP [H]
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MKKSLFIASILASLLFIGCTANTSNNKENLIKIGVTIYKYDDNFMSYVRRYIESSANAKARLFINDSQNNQAKQLEQIDT MIAKGVKALAINLVDPKSAITVIAKAKKANLPVIFFNKEPELELLNSYEKSWYVGTNSQESGIIQGTIITNLWNKNKEQW DLNQDGKIQYVLLKGEPGHPDAEARTKYVIDEVKKAGIEVEKLAIDTAMWDATKAANKMDVWISKYGNKIELVIANNDAM ALGALSSLEKAGYFKDNKLVPIVGVDAIPEVLIKIREGKIVGTVLNDAKNQGKATFDLAFNAALGKDILADTQWKLDVNK AVLVPYVSITKDNLGVAEDAYN
Sequences:
>Translated_342_residues MKKSLFIASILASLLFIGCTANTSNNKENLIKIGVTIYKYDDNFMSYVRRYIESSANAKARLFINDSQNNQAKQLEQIDT MIAKGVKALAINLVDPKSAITVIAKAKKANLPVIFFNKEPELELLNSYEKSWYVGTNSQESGIIQGTIITNLWNKNKEQW DLNQDGKIQYVLLKGEPGHPDAEARTKYVIDEVKKAGIEVEKLAIDTAMWDATKAANKMDVWISKYGNKIELVIANNDAM ALGALSSLEKAGYFKDNKLVPIVGVDAIPEVLIKIREGKIVGTVLNDAKNQGKATFDLAFNAALGKDILADTQWKLDVNK AVLVPYVSITKDNLGVAEDAYN >Mature_342_residues MKKSLFIASILASLLFIGCTANTSNNKENLIKIGVTIYKYDDNFMSYVRRYIESSANAKARLFINDSQNNQAKQLEQIDT MIAKGVKALAINLVDPKSAITVIAKAKKANLPVIFFNKEPELELLNSYEKSWYVGTNSQESGIIQGTIITNLWNKNKEQW DLNQDGKIQYVLLKGEPGHPDAEARTKYVIDEVKKAGIEVEKLAIDTAMWDATKAANKMDVWISKYGNKIELVIANNDAM ALGALSSLEKAGYFKDNKLVPIVGVDAIPEVLIKIREGKIVGTVLNDAKNQGKATFDLAFNAALGKDILADTQWKLDVNK AVLVPYVSITKDNLGVAEDAYN
Specific function: This protein is involved in the active transport of galactose and glucose. It plays a role in the chemotaxis towards the two sugars by interacting with the trg chemoreceptor [H]
COG id: COG1879
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788473, Length=336, Percent_Identity=57.4404761904762, Blast_Score=371, Evalue=1e-104, Organism=Escherichia coli, GI1790192, Length=223, Percent_Identity=27.3542600896861, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: 4720 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 1320 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001761 [H]
Pfam domain/function: PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 37797; Mature: 37797
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSLFIASILASLLFIGCTANTSNNKENLIKIGVTIYKYDDNFMSYVRRYIESSANAKA CCCHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEEEEEEECCHHHHHHHHHHHCCCCCEE RLFINDSQNNQAKQLEQIDTMIAKGVKALAINLVDPKSAITVIAKAKKANLPVIFFNKEP EEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEECCHHHEEEEEEHHCCCCCEEEECCCC ELELLNSYEKSWYVGTNSQESGIIQGTIITNLWNKNKEQWDLNQDGKIQYVLLKGEPGHP CHHHHHCCCCEEEECCCCCCCCEEEEEEEEHHHCCCCCCCCCCCCCCEEEEEEECCCCCC DAEARTKYVIDEVKKAGIEVEKLAIDTAMWDATKAANKMDVWISKYGNKIELVIANNDAM CHHHHHHHHHHHHHHCCCEEEHEEEHHHHHHHHHCCCHHEEEEECCCCEEEEEEECCCCE ALGALSSLEKAGYFKDNKLVPIVGVDAIPEVLIKIREGKIVGTVLNDAKNQGKATFDLAF EHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHEEECCEEEEEEHHCCCCCCCEEEEEEE NAALGKDILADTQWKLDVNKAVLVPYVSITKDNLGVAEDAYN ECHHCCHHHCCCEEEEECCCEEEEEEEEEECCCCCCCCCCCC >Mature Secondary Structure MKKSLFIASILASLLFIGCTANTSNNKENLIKIGVTIYKYDDNFMSYVRRYIESSANAKA CCCHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEEEEEEECCHHHHHHHHHHHCCCCCEE RLFINDSQNNQAKQLEQIDTMIAKGVKALAINLVDPKSAITVIAKAKKANLPVIFFNKEP EEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEECCHHHEEEEEEHHCCCCCEEEECCCC ELELLNSYEKSWYVGTNSQESGIIQGTIITNLWNKNKEQWDLNQDGKIQYVLLKGEPGHP CHHHHHCCCCEEEECCCCCCCCEEEEEEEEHHHCCCCCCCCCCCCCCEEEEEEECCCCCC DAEARTKYVIDEVKKAGIEVEKLAIDTAMWDATKAANKMDVWISKYGNKIELVIANNDAM CHHHHHHHHHHHHHHCCCEEEHEEEHHHHHHHHHCCCHHEEEEECCCCEEEEEEECCCCE ALGALSSLEKAGYFKDNKLVPIVGVDAIPEVLIKIREGKIVGTVLNDAKNQGKATFDLAF EHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHEEECCEEEEEEHHCCCCCCCEEEEEEE NAALGKDILADTQWKLDVNKAVLVPYVSITKDNLGVAEDAYN ECHHCCHHHCCCEEEEECCCEEEEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; beta-D-galactose [Periplasm]; H2O [C]
Specific reaction: ATP + beta-D-galactose [Periplasm] + H2O = ADP + phosphate + beta-D-galactose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA