| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474621
Identifier: 113474621
GI number: 113474621
Start: 1255684
End: 1255911
Strand: Reverse
Name: 113474621
Synonym: Tery_0789
Alternate gene names: NA
Gene position: 1255911-1255684 (Counterclockwise)
Preceding gene: 113474628
Following gene: 113474620
Centisome position: 16.21
GC content: 39.91
Gene sequence:
>228_bases ATGTCTATGGTTCTAGAGACTCACGTTGAGGTCAGTAGTTTAAGAGGGATTACTCGAACAGTCAATTTGGCCGATAATAC GGTAGTTAGTTTGGCGAGAGCTGCCTCTGAAAAAGGACAAATGATTCATAATGCTCATGTCCAGAATATCAATACCTCAA AAATCAGCAGTGATGAGTTTTGGTCATTCGTCCAAAAAAACGAAAACAGTGCCAGTATCAGGAATTGA
Upstream 100 bases:
>100_bases CCAGTAATGTTCTTGACGATATTATTGTCCTGAATGCCTACAAACTTTCACCGATACTTTTGACACTCTCTACTATCGTA GAACAATTCAACCTGAACAA
Downstream 100 bases:
>100_bases CAGAAGGAGATTTTGGGTTGGCAAGCCCCTAGGCTTCATCCAGTGGATTAATTCTGAGTGCTAGAGTAGATAAACATACT GACCAGTTGATTGAGGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MSMVLETHVEVSSLRGITRTVNLADNTVVSLARAASEKGQMIHNAHVQNINTSKISSDEFWSFVQKNENSASIRN
Sequences:
>Translated_75_residues MSMVLETHVEVSSLRGITRTVNLADNTVVSLARAASEKGQMIHNAHVQNINTSKISSDEFWSFVQKNENSASIRN >Mature_74_residues SMVLETHVEVSSLRGITRTVNLADNTVVSLARAASEKGQMIHNAHVQNINTSKISSDEFWSFVQKNENSASIRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8301; Mature: 8170
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMVLETHVEVSSLRGITRTVNLADNTVVSLARAASEKGQMIHNAHVQNINTSKISSDEF CCCCHHCCCCHHHHCCCCEEEECCCHHHHHHHHHHHHCCCEEHHHHCCCCCCCCCCCHHH WSFVQKNENSASIRN HHHHHCCCCCCCCCC >Mature Secondary Structure SMVLETHVEVSSLRGITRTVNLADNTVVSLARAASEKGQMIHNAHVQNINTSKISSDEF CCCHHCCCCHHHHCCCCEEEECCCHHHHHHHHHHHHCCCEEHHHHCCCCCCCCCCCHHH WSFVQKNENSASIRN HHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA