| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is mglC [H]
Identifier: 113474628
GI number: 113474628
Start: 1266310
End: 1267314
Strand: Reverse
Name: mglC [H]
Synonym: Tery_0799
Alternate gene names: 113474628
Gene position: 1267314-1266310 (Counterclockwise)
Preceding gene: 113474629
Following gene: 113474621
Centisome position: 16.35
GC content: 31.94
Gene sequence:
>1005_bases ATGATTAAACAAATTATAAACTTTGCTCTTAATAATGCTATCTACTTAGTGTTAATCCTATTGTTAATTGTTATAACTAT AATTTCACCTGATTTTTTAACAGTTAATAATTTTCGTCTGATTTTAACTCAAGCTTCGACTCGAATTATTATTGCTTTGG GTGTTGGGGGAGTTTTAATTACTCAAGGTACTGATTTATCTGCAGGACGTATAGTAGGAGTAGGAGCAGTATTATCAGCT TCATTATTACAAGGAGCAGATTATCCTTACCGTATGTATCCAAATTTAATGGAATTACCTTTAATAATTCCGATGTTATT TACTCTGATAATTTGTGCTTTTTTTGGGTTCATTAATGGAGTGGTTGTAGGTATGTTTAAAGTACCTCCTTTTATTGCTA CATTAGGAACAATGATTATAATTTATGGATTAAATTCTATTTATTTTGATCGCCCTCCTTTAGGAGCACAACCAGTTGGT GGATTAGCTGAAAATTTTACTACTTTTGTTCAAGGTGATTTGATTTTAGGTTCCTTTGAAATTCCATATTTAATTATCTA TGCAGTCATAGTAATTGGAGTTATTTGGGTTTTATGGAATCAAACTATTTTGGGCAGAAATATGTATGCTATAGGAGGAA ATATTGAAGCAGCAACTGTCTCTGGTGTTAGTGTTATTAAGTATTTATTAATTGTTTATACTTTAGCGGGTTTATTATAC GGATTTGCTGGAATATTAGAAGCAGGTCGTGTTGGCAGTGCCACTAATAATACTGGTAATATGTATGAGTTAGATGCCAT TGCTGCTTGTGTAGTGGGAGGAGTTTCTACTTCCGGAGGTATTGGTACTGTATCAGGAGTTGTCACAGGAGTCTTGATTT TCCAAATTATTAATTATGGTCTGGTATTTATTGAGTTAAGTCCTTATTTACAATTTATTGTTAAGGGATTAATTATTGTC AGTGCAGTGGCAATTGATATTAGAAAATATGTTAGACAAAGTTGA
Upstream 100 bases:
>100_bases AATTTTTAAACTTTTAAAAATATATTTTTTTTTGACTTACTTATTTAAATTGAGAGAGATTTTGGTGTGAACAAAAAAAC AATTATATTTAAATTTACCA
Downstream 100 bases:
>100_bases CTTTTATTCAGAATTAGATAGTGGTAAAAAAGCAACGAATTATAAATTGACTTCGTGAAACGGAGGGTGAATTTTTTGAA TGCTAGAAGTACTTACTAAA
Product: beta-methylgalactoside transporter inner membrane component
Products: ADP; phosphate; beta-D-galactose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MIKQIINFALNNAIYLVLILLLIVITIISPDFLTVNNFRLILTQASTRIIIALGVGGVLITQGTDLSAGRIVGVGAVLSA SLLQGADYPYRMYPNLMELPLIIPMLFTLIICAFFGFINGVVVGMFKVPPFIATLGTMIIIYGLNSIYFDRPPLGAQPVG GLAENFTTFVQGDLILGSFEIPYLIIYAVIVIGVIWVLWNQTILGRNMYAIGGNIEAATVSGVSVIKYLLIVYTLAGLLY GFAGILEAGRVGSATNNTGNMYELDAIAACVVGGVSTSGGIGTVSGVVTGVLIFQIINYGLVFIELSPYLQFIVKGLIIV SAVAIDIRKYVRQS
Sequences:
>Translated_334_residues MIKQIINFALNNAIYLVLILLLIVITIISPDFLTVNNFRLILTQASTRIIIALGVGGVLITQGTDLSAGRIVGVGAVLSA SLLQGADYPYRMYPNLMELPLIIPMLFTLIICAFFGFINGVVVGMFKVPPFIATLGTMIIIYGLNSIYFDRPPLGAQPVG GLAENFTTFVQGDLILGSFEIPYLIIYAVIVIGVIWVLWNQTILGRNMYAIGGNIEAATVSGVSVIKYLLIVYTLAGLLY GFAGILEAGRVGSATNNTGNMYELDAIAACVVGGVSTSGGIGTVSGVVTGVLIFQIINYGLVFIELSPYLQFIVKGLIIV SAVAIDIRKYVRQS >Mature_334_residues MIKQIINFALNNAIYLVLILLLIVITIISPDFLTVNNFRLILTQASTRIIIALGVGGVLITQGTDLSAGRIVGVGAVLSA SLLQGADYPYRMYPNLMELPLIIPMLFTLIICAFFGFINGVVVGMFKVPPFIATLGTMIIIYGLNSIYFDRPPLGAQPVG GLAENFTTFVQGDLILGSFEIPYLIIYAVIVIGVIWVLWNQTILGRNMYAIGGNIEAATVSGVSVIKYLLIVYTLAGLLY GFAGILEAGRVGSATNNTGNMYELDAIAACVVGGVSTSGGIGTVSGVVTGVLIFQIINYGLVFIELSPYLQFIVKGLIIV SAVAIDIRKYVRQS
Specific function: Part of the binding-protein-dependent transport system for galactoside. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4211
COG function: function code G; ABC-type glucose/galactose transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788471, Length=332, Percent_Identity=54.2168674698795, Blast_Score=301, Evalue=5e-83, Organism=Escherichia coli, GI1790191, Length=320, Percent_Identity=35.625, Blast_Score=158, Evalue=5e-40, Organism=Escherichia coli, GI1790524, Length=329, Percent_Identity=34.3465045592705, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1788896, Length=334, Percent_Identity=32.9341317365269, Blast_Score=131, Evalue=7e-32, Organism=Escherichia coli, GI145693152, Length=319, Percent_Identity=32.6018808777429, Blast_Score=127, Evalue=7e-31, Organism=Escherichia coli, GI1789992, Length=354, Percent_Identity=30.5084745762712, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1787793, Length=301, Percent_Identity=30.8970099667774, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI87082395, Length=269, Percent_Identity=30.8550185873606, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI145693214, Length=273, Percent_Identity=31.5018315018315, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787794, Length=300, Percent_Identity=28.3333333333333, Blast_Score=71, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 35701; Mature: 35701
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKQIINFALNNAIYLVLILLLIVITIISPDFLTVNNFRLILTQASTRIIIALGVGGVLI CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEEECCCEEEEEEECCCEEE TQGTDLSAGRIVGVGAVLSASLLQGADYPYRMYPNLMELPLIIPMLFTLIICAFFGFING ECCCCCCCCCEEEHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH VVVGMFKVPPFIATLGTMIIIYGLNSIYFDRPPLGAQPVGGLAENFTTFVQGDLILGSFE HHHHHHHCCHHHHHHHHHHHHHCCCHHEECCCCCCCCCCCHHHHHHHHHHCCCEEEECCC IPYLIIYAVIVIGVIWVLWNQTILGRNMYAIGGNIEAATVSGVSVIKYLLIVYTLAGLLY HHHHHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHH GFAGILEAGRVGSATNNTGNMYELDAIAACVVGGVSTSGGIGTVSGVVTGVLIFQIINYG HHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC LVFIELSPYLQFIVKGLIIVSAVAIDIRKYVRQS EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIKQIINFALNNAIYLVLILLLIVITIISPDFLTVNNFRLILTQASTRIIIALGVGGVLI CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEEECCCEEEEEEECCCEEE TQGTDLSAGRIVGVGAVLSASLLQGADYPYRMYPNLMELPLIIPMLFTLIICAFFGFING ECCCCCCCCCEEEHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH VVVGMFKVPPFIATLGTMIIIYGLNSIYFDRPPLGAQPVGGLAENFTTFVQGDLILGSFE HHHHHHHCCHHHHHHHHHHHHHCCCHHEECCCCCCCCCCCHHHHHHHHHHCCCEEEECCC IPYLIIYAVIVIGVIWVLWNQTILGRNMYAIGGNIEAATVSGVSVIKYLLIVYTLAGLLY HHHHHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHH GFAGILEAGRVGSATNNTGNMYELDAIAACVVGGVSTSGGIGTVSGVVTGVLIFQIINYG HHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC LVFIELSPYLQFIVKGLIIVSAVAIDIRKYVRQS EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; beta-D-galactose [Periplasm]; H2O [C]
Specific reaction: ATP + beta-D-galactose [Periplasm] + H2O = ADP + phosphate + beta-D-galactose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]