| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474584
Identifier: 113474584
GI number: 113474584
Start: 1198130
End: 1198312
Strand: Reverse
Name: 113474584
Synonym: Tery_0741
Alternate gene names: NA
Gene position: 1198312-1198130 (Counterclockwise)
Preceding gene: 113474585
Following gene: 113474578
Centisome position: 15.46
GC content: 36.07
Gene sequence:
>183_bases ATGGCTAAACGCCGCAATCCAAAAAAAGAAAAAGCACAACGTAATCAAGCTTACGCACGCAAGTTTCGTAAAAAGAAGAA TACAGGTTTTTTCTCAAAGCGATATTCATCTAAGTTTACATCTGGTAATAATCAAAACGGTAACGATCAATCAGAAGAGA CTACTAGTGCTGTAGAAGAATAG
Upstream 100 bases:
>100_bases CAGTTTGAGATTTAGGAATCTTGGGTCATAGCTCAGTGTAGCTTTTAGGAAGCTAATCCCCATTTATGGCTTTCAGAGGA TGTTAATTAGTGAGGTTATA
Downstream 100 bases:
>100_bases TATGTTTTAATATTTTAATGTTCAAAGTTCTTAACTATGAATTTTGAAATATAAAATCTAGATTTGAAAATTATATAGTC AAATCTAGATTTGAAAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 59
Protein sequence:
>60_residues MAKRRNPKKEKAQRNQAYARKFRKKKNTGFFSKRYSSKFTSGNNQNGNDQSEETTSAVEE
Sequences:
>Translated_60_residues MAKRRNPKKEKAQRNQAYARKFRKKKNTGFFSKRYSSKFTSGNNQNGNDQSEETTSAVEE >Mature_59_residues AKRRNPKKEKAQRNQAYARKFRKKKNTGFFSKRYSSKFTSGNNQNGNDQSEETTSAVEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7005; Mature: 6874
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRRNPKKEKAQRNQAYARKFRKKKNTGFFSKRYSSKFTSGNNQNGNDQSEETTSAVEE CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure AKRRNPKKEKAQRNQAYARKFRKKKNTGFFSKRYSSKFTSGNNQNGNDQSEETTSAVEE CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA