Click here to switch to the map view.

The map label for this gene is dnaG [H]

Identifier: 113474578

GI number: 113474578

Start: 1187125

End: 1189152

Strand: Reverse

Name: dnaG [H]

Synonym: Tery_0735

Alternate gene names: 113474578

Gene position: 1189152-1187125 (Counterclockwise)

Preceding gene: 113474584

Following gene: 113474576

Centisome position: 15.34

GC content: 32.05

Gene sequence:

>2028_bases
ATGAATAATTTCCGTTTTCATCAAGATACTATTACAGAAGTCAAGCAAAGGGCTGACATTTATGATGTTATTTCAGAGCA
TCTTTTATTAAAAAAGCGGGGAAAAGATTATGTAGGATTATGCCCTTTTCATGAAGAAAAAACTCCTAGCTTTACTGTTA
GTACGACTAAACAACTGTACTACTGTTTTGGTTGTGGTGCAGCTGGTAACGTGTTGAAGTTTTTGATGGAAATTGGTAAG
TCTTCTTTTAGTGATGTTGTATTAGATTTAGCGAGACGTTATCAAATACCAATTAAAACAGAATTACCGGAAAATAGACA
AGAGTTTCAACGGCAAATTTCTCTGCGTGAAAAACTTTATGAAATCTTGGCAATAGCTAATAGTTTTTATCAACATGCCT
TAAGACAACCCCAGGGAAAAATTGCTTTAGAGTATTTACAAATTTCACGTCAAACTTCAGAAGAAACCATTCAAAATTTT
CAATTGGGTTATGCTCCTAATGGTTGGGAAACTATTTATGGTTATCTGGTAGAACAAAAAGGTTTGCCTGTAGAATTAGT
CGAAAAAACTGGATTAATTTTGTCAAGAAAATCTGGTACTGGTTATTACGATAGATTTCGCGATCGCTTAATGATTCCTA
TCAATGATATTCAAGGTAGAGTTATTGGTTTTGGTGGCAGAACTTTAAGTGATGAACAACCTAAATACTTGAATTCTCCT
GAGACAGAATTATTTGATAAGGGTAAAACTTTATTTGCTTTGGATAAAGCAAAAACTGCTATTTCTAAACAAGATAAAGC
TGTCGTTGTAGAGGGATATTTTGACGCGATCGCTCTTCATGCTTCAGGAATTAATAATGTTGTTGCTTCTCTTGGTACGG
CCTTAAGTTCAATTCAAATTAGACAACTTTTACGTTACACAGAATCTAAACAAATCATCTTAAATTTTGATGCTGACCGA
GCCGGTATTCAAGCTACTGAAAGAGCAATTGGAGAAATGGAAAAATTTGCTTATAGTGGGGAAGTTCAACTGAGAATTTT
AAACATTCCTGACGGGAAAGATGCTGACGAATATTTGAAAACTTATTCTGGTAAAAAATATCAAGAATTATTGGTTAATT
CTACTCTATGGATTGATTGGCAAATTCAAAATATAGTCAGAACTAAAAATCTTAGTCTGGCAGATGAATATACTAAAGCT
AGTCAAGAAATAGTTAAAATATTAACGAAAATAACTAATGATAATCAATTTACTTATTATCTTCAATATTGTGCGCAAAT
TTTGAGTCAGGAAGACACTCGGAGAGTTTCATTAATTTATGAAAATTTATTAACTCAAGTTTTTATTAATTGGAAAAAGA
TCTTAGCTAAGGGTGAATTTATATCACCACCGTTACTAGTAGCGAAACAATTAAAATCTAATCAGCGAAATAATAGGAAC
TTTACTAAGGGAAAAAAAAATCATTCACCAGAGGTTTTATCTCCACCTGTAAAAGGGAGTTTATTGGCAGAAGCTGAGTC
TTTATTATTGCGTATTTACTTACATTGTCCTAACTATCGTCGAGAGGTGAAAGATGCAATGGAAGCAAGAGATTTACAGT
TTAGCTTCGCTCACAATAGACTTTTGTGGCAGCAAATTGTTTCTGCAGAAAATATCTCGGAAAATGAAATTAATCAATCA
GATGATTTAATTTCAAAGTTACAAGATACTTACTGGGAAAATCTAGATAAATTCCCTAATTTAAAGCATCTTTTTCATTT
AGATGAAAAAACAAAAAAAAATATTCTTAGAGCCCCTTTAGAAATTCGTTCTTCAGTAGCAACTATAGAATTAATTATAT
CAAAAAAACGTCAAAGTACTCTCTTGAATATGTGGCAAGAAACTGATTTATCCGTTGACCCAGAATTAGCTGAAAAATAT
AAAGAAAAATTTTATAGTGAATCACAATGGATTCAGGAATTGGAGAGGTTAAGACTGACAACTATTCAAGATTTAATTGA
AGTACCTTTAGGGGAATTAACTAACTAA

Upstream 100 bases:

>100_bases
ATTTATGGCAGATAAGCACAAAAAAAATCAAGTACTGAGTAGTAAAACTTAATCTTGACTAGAAGATTCAAAGTTTAGAT
TAAATTATTTAATAAATTCT

Downstream 100 bases:

>100_bases
AATCATAGTACAAAAATAACTCTTCAAATTTTTCAGAGTAAACAAGTAAATATTTGAATATTAATGAATCTAAAAAACGA
ATTATGTTATGAAATAGTAA

Product: DNA primase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 675; Mature: 675

Protein sequence:

>675_residues
MNNFRFHQDTITEVKQRADIYDVISEHLLLKKRGKDYVGLCPFHEEKTPSFTVSTTKQLYYCFGCGAAGNVLKFLMEIGK
SSFSDVVLDLARRYQIPIKTELPENRQEFQRQISLREKLYEILAIANSFYQHALRQPQGKIALEYLQISRQTSEETIQNF
QLGYAPNGWETIYGYLVEQKGLPVELVEKTGLILSRKSGTGYYDRFRDRLMIPINDIQGRVIGFGGRTLSDEQPKYLNSP
ETELFDKGKTLFALDKAKTAISKQDKAVVVEGYFDAIALHASGINNVVASLGTALSSIQIRQLLRYTESKQIILNFDADR
AGIQATERAIGEMEKFAYSGEVQLRILNIPDGKDADEYLKTYSGKKYQELLVNSTLWIDWQIQNIVRTKNLSLADEYTKA
SQEIVKILTKITNDNQFTYYLQYCAQILSQEDTRRVSLIYENLLTQVFINWKKILAKGEFISPPLLVAKQLKSNQRNNRN
FTKGKKNHSPEVLSPPVKGSLLAEAESLLLRIYLHCPNYRREVKDAMEARDLQFSFAHNRLLWQQIVSAENISENEINQS
DDLISKLQDTYWENLDKFPNLKHLFHLDEKTKKNILRAPLEIRSSVATIELIISKKRQSTLLNMWQETDLSVDPELAEKY
KEKFYSESQWIQELERLRLTTIQDLIEVPLGELTN

Sequences:

>Translated_675_residues
MNNFRFHQDTITEVKQRADIYDVISEHLLLKKRGKDYVGLCPFHEEKTPSFTVSTTKQLYYCFGCGAAGNVLKFLMEIGK
SSFSDVVLDLARRYQIPIKTELPENRQEFQRQISLREKLYEILAIANSFYQHALRQPQGKIALEYLQISRQTSEETIQNF
QLGYAPNGWETIYGYLVEQKGLPVELVEKTGLILSRKSGTGYYDRFRDRLMIPINDIQGRVIGFGGRTLSDEQPKYLNSP
ETELFDKGKTLFALDKAKTAISKQDKAVVVEGYFDAIALHASGINNVVASLGTALSSIQIRQLLRYTESKQIILNFDADR
AGIQATERAIGEMEKFAYSGEVQLRILNIPDGKDADEYLKTYSGKKYQELLVNSTLWIDWQIQNIVRTKNLSLADEYTKA
SQEIVKILTKITNDNQFTYYLQYCAQILSQEDTRRVSLIYENLLTQVFINWKKILAKGEFISPPLLVAKQLKSNQRNNRN
FTKGKKNHSPEVLSPPVKGSLLAEAESLLLRIYLHCPNYRREVKDAMEARDLQFSFAHNRLLWQQIVSAENISENEINQS
DDLISKLQDTYWENLDKFPNLKHLFHLDEKTKKNILRAPLEIRSSVATIELIISKKRQSTLLNMWQETDLSVDPELAEKY
KEKFYSESQWIQELERLRLTTIQDLIEVPLGELTN
>Mature_675_residues
MNNFRFHQDTITEVKQRADIYDVISEHLLLKKRGKDYVGLCPFHEEKTPSFTVSTTKQLYYCFGCGAAGNVLKFLMEIGK
SSFSDVVLDLARRYQIPIKTELPENRQEFQRQISLREKLYEILAIANSFYQHALRQPQGKIALEYLQISRQTSEETIQNF
QLGYAPNGWETIYGYLVEQKGLPVELVEKTGLILSRKSGTGYYDRFRDRLMIPINDIQGRVIGFGGRTLSDEQPKYLNSP
ETELFDKGKTLFALDKAKTAISKQDKAVVVEGYFDAIALHASGINNVVASLGTALSSIQIRQLLRYTESKQIILNFDADR
AGIQATERAIGEMEKFAYSGEVQLRILNIPDGKDADEYLKTYSGKKYQELLVNSTLWIDWQIQNIVRTKNLSLADEYTKA
SQEIVKILTKITNDNQFTYYLQYCAQILSQEDTRRVSLIYENLLTQVFINWKKILAKGEFISPPLLVAKQLKSNQRNNRN
FTKGKKNHSPEVLSPPVKGSLLAEAESLLLRIYLHCPNYRREVKDAMEARDLQFSFAHNRLLWQQIVSAENISENEINQS
DDLISKLQDTYWENLDKFPNLKHLFHLDEKTKKNILRAPLEIRSSVATIELIISKKRQSTLLNMWQETDLSVDPELAEKY
KEKFYSESQWIQELERLRLTTIQDLIEVPLGELTN

Specific function: DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments on both template strands at replication forks during chromosomal DNA synthesis [H]

COG id: COG0358

COG function: function code L; DNA primase (bacterial type)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1789447, Length=415, Percent_Identity=36.3855421686747, Blast_Score=276, Evalue=2e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013264
- InterPro:   IPR006295
- InterPro:   IPR006171
- InterPro:   IPR002694 [H]

Pfam domain/function: PF01751 Toprim; PF08275 Toprim_N; PF01807 zf-CHC2 [H]

EC number: 2.7.7.-

Molecular weight: Translated: 77900; Mature: 77900

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNFRFHQDTITEVKQRADIYDVISEHLLLKKRGKDYVGLCPFHEEKTPSFTVSTTKQLY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEECHHEEE
YCFGCGAAGNVLKFLMEIGKSSFSDVVLDLARRYQIPIKTELPENRQEFQRQISLREKLY
EEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
EILAIANSFYQHALRQPQGKIALEYLQISRQTSEETIQNFQLGYAPNGWETIYGYLVEQK
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
GLPVELVEKTGLILSRKSGTGYYDRFRDRLMIPINDIQGRVIGFGGRTLSDEQPKYLNSP
CCCHHHHHHCCCEEEECCCCCHHHHHHCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCC
ETELFDKGKTLFALDKAKTAISKQDKAVVVEGYFDAIALHASGINNVVASLGTALSSIQI
CHHHHHCCCEEEEEHHHHHHHCCCCCEEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RQLLRYTESKQIILNFDADRAGIQATERAIGEMEKFAYSGEVQLRILNIPDGKDADEYLK
HHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHH
TYSGKKYQELLVNSTLWIDWQIQNIVRTKNLSLADEYTKASQEIVKILTKITNDNQFTYY
HHCCCHHHHHHHCCEEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LQYCAQILSQEDTRRVSLIYENLLTQVFINWKKILAKGEFISPPLLVAKQLKSNQRNNRN
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCC
FTKGKKNHSPEVLSPPVKGSLLAEAESLLLRIYLHCPNYRREVKDAMEARDLQFSFAHNR
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHH
LLWQQIVSAENISENEINQSDDLISKLQDTYWENLDKFPNLKHLFHLDEKTKKNILRAPL
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCH
EIRSSVATIELIISKKRQSTLLNMWQETDLSVDPELAEKYKEKFYSESQWIQELERLRLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
TIQDLIEVPLGELTN
HHHHHHHCCHHHCCC
>Mature Secondary Structure
MNNFRFHQDTITEVKQRADIYDVISEHLLLKKRGKDYVGLCPFHEEKTPSFTVSTTKQLY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEECHHEEE
YCFGCGAAGNVLKFLMEIGKSSFSDVVLDLARRYQIPIKTELPENRQEFQRQISLREKLY
EEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
EILAIANSFYQHALRQPQGKIALEYLQISRQTSEETIQNFQLGYAPNGWETIYGYLVEQK
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
GLPVELVEKTGLILSRKSGTGYYDRFRDRLMIPINDIQGRVIGFGGRTLSDEQPKYLNSP
CCCHHHHHHCCCEEEECCCCCHHHHHHCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCC
ETELFDKGKTLFALDKAKTAISKQDKAVVVEGYFDAIALHASGINNVVASLGTALSSIQI
CHHHHHCCCEEEEEHHHHHHHCCCCCEEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RQLLRYTESKQIILNFDADRAGIQATERAIGEMEKFAYSGEVQLRILNIPDGKDADEYLK
HHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHH
TYSGKKYQELLVNSTLWIDWQIQNIVRTKNLSLADEYTKASQEIVKILTKITNDNQFTYY
HHCCCHHHHHHHCCEEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LQYCAQILSQEDTRRVSLIYENLLTQVFINWKKILAKGEFISPPLLVAKQLKSNQRNNRN
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCC
FTKGKKNHSPEVLSPPVKGSLLAEAESLLLRIYLHCPNYRREVKDAMEARDLQFSFAHNR
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHH
LLWQQIVSAENISENEINQSDDLISKLQDTYWENLDKFPNLKHLFHLDEKTKKNILRAPL
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCH
EIRSSVATIELIISKKRQSTLLNMWQETDLSVDPELAEKYKEKFYSESQWIQELERLRLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
TIQDLIEVPLGELTN
HHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferring phosphorus-containing groups; Nucleotidyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]