Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113474542
Identifier: 113474542
GI number: 113474542
Start: 1129992
End: 1130219
Strand: Reverse
Name: 113474542
Synonym: Tery_0695
Alternate gene names: NA
Gene position: 1130219-1129992 (Counterclockwise)
Preceding gene: 113474547
Following gene: 113474536
Centisome position: 14.58
GC content: 39.47
Gene sequence:
>228_bases ATGCCATATTCTAGTAGCTTGACAGATGAGGAGTGGGTTATAATTGAACCCCTGTTACCCAAAAAGAAAAGAACTTTTCC CCCCAAATGGACTAAAAGAGAAATATTGGATGGTGTTCTCTACCAACTTAAGAATGGTTGTAACTGGTGTGATTTACCCA AGGATTTACCTCCTTATTCGACGGTATTTTGGCACTACAAACAATGGCGTATTGGAAGGGGTAATTGA
Upstream 100 bases:
>100_bases TTCAGAATTGAATTCCAATTTTTTGAGCCATTATAACCATACATATCTAAATATATAGAAGCCATTTGGGATCTTTCTGA AAGACTATAATGGATAGAAA
Downstream 100 bases:
>100_bases GAAGATTAGAGATGTTTTACATGGACAACTGCGTCAAAAGGTAAAAAAAAAAGCGCTCCGGGACAACTTTAATCATCATT GACTCACAAGCAGTCAAAAA
Product: IS5 family transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; Transposase Of; IS5 Family Transposase; Transposase And Inactivated Derivatives-Like
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MPYSSSLTDEEWVIIEPLLPKKKRTFPPKWTKREILDGVLYQLKNGCNWCDLPKDLPPYSTVFWHYKQWRIGRGN
Sequences:
>Translated_75_residues MPYSSSLTDEEWVIIEPLLPKKKRTFPPKWTKREILDGVLYQLKNGCNWCDLPKDLPPYSTVFWHYKQWRIGRGN >Mature_74_residues PYSSSLTDEEWVIIEPLLPKKKRTFPPKWTKREILDGVLYQLKNGCNWCDLPKDLPPYSTVFWHYKQWRIGRGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9010; Mature: 8878
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYSSSLTDEEWVIIEPLLPKKKRTFPPKWTKREILDGVLYQLKNGCNWCDLPKDLPPYS CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC TVFWHYKQWRIGRGN CEEECCCEEECCCCC >Mature Secondary Structure PYSSSLTDEEWVIIEPLLPKKKRTFPPKWTKREILDGVLYQLKNGCNWCDLPKDLPPYS CCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC TVFWHYKQWRIGRGN CEEECCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA