Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
---|---|
Accession | NC_008312 |
Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is folB [H]
Identifier: 113474536
GI number: 113474536
Start: 1123316
End: 1123678
Strand: Reverse
Name: folB [H]
Synonym: Tery_0687
Alternate gene names: 113474536
Gene position: 1123678-1123316 (Counterclockwise)
Preceding gene: 113474542
Following gene: 113474535
Centisome position: 14.5
GC content: 34.71
Gene sequence:
>363_bases ATGGACTCAATCTCCATTACTGGAATTCGATGCTACGGATACATCGGATTTTTTCCAGAAGAGAAAGTATTAGGTCAATG GTTTGAAGTAGATTTAACTTTGGGGTTAGATTTGACTGCTGCTAGCAAAAGTGATGCCTTAGAAGATACTGTAGATTATG GTAGTATAGTTAATACTGTCCAAAAACTAGTAAAACAATCTAAGTCTGCTTTATTAGAAAAAGTAGCGAATACGATCGCT ACAGATATTTTACAACAACGACTAGTACAAAATGTCAAGGTTCGTTTAACTAAATTAGCCGCACCTATACCCGATTTTGG TGGCAAAGTTACTATTGAAATTACTAGAGTAAAGGAGAAATAA
Upstream 100 bases:
>100_bases AAATATATACCCTTTCATAAATTATCTGAATAGTTTAACCATTTAATATTAAAACCATTTAATATAATAAAATGATGGAA CTATTTTTTAATTAGTTATT
Downstream 100 bases:
>100_bases CTTATTTAAAAATTTAATTATAAACTATCCACAATAGGCTAGTTTTCCCAATTATTAAATAGTAAAATTTTCTCTTTTTT TCGTTCTAATTTTTAATAAT
Product: dihydroneopterin aldolase
Products: NA
Alternate protein names: DHNA [H]
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MDSISITGIRCYGYIGFFPEEKVLGQWFEVDLTLGLDLTAASKSDALEDTVDYGSIVNTVQKLVKQSKSALLEKVANTIA TDILQQRLVQNVKVRLTKLAAPIPDFGGKVTIEITRVKEK
Sequences:
>Translated_120_residues MDSISITGIRCYGYIGFFPEEKVLGQWFEVDLTLGLDLTAASKSDALEDTVDYGSIVNTVQKLVKQSKSALLEKVANTIA TDILQQRLVQNVKVRLTKLAAPIPDFGGKVTIEITRVKEK >Mature_120_residues MDSISITGIRCYGYIGFFPEEKVLGQWFEVDLTLGLDLTAASKSDALEDTVDYGSIVNTVQKLVKQSKSALLEKVANTIA TDILQQRLVQNVKVRLTKLAAPIPDFGGKVTIEITRVKEK
Specific function: Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin [H]
COG id: COG1539
COG function: function code H; Dihydroneopterin aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHNA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006156 - InterPro: IPR006157 [H]
Pfam domain/function: PF02152 FolB [H]
EC number: =4.1.2.25 [H]
Molecular weight: Translated: 13216; Mature: 13216
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSISITGIRCYGYIGFFPEEKVLGQWFEVDLTLGLDLTAASKSDALEDTVDYGSIVNTV CCCCEEEEEEEEEEECCCCCHHHHHHHHEEEEEECCEEECCCCCCHHHHHHHHHHHHHHH QKLVKQSKSALLEKVANTIATDILQQRLVQNVKVRLTKLAAPIPDFGGKVTIEITRVKEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCC >Mature Secondary Structure MDSISITGIRCYGYIGFFPEEKVLGQWFEVDLTLGLDLTAASKSDALEDTVDYGSIVNTV CCCCEEEEEEEEEEECCCCCHHHHHHHHEEEEEECCEEECCCCCCHHHHHHHHHHHHHHH QKLVKQSKSALLEKVANTIATDILQQRLVQNVKVRLTKLAAPIPDFGGKVTIEITRVKEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]