Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474542

Identifier: 113474542

GI number: 113474542

Start: 1129992

End: 1130219

Strand: Reverse

Name: 113474542

Synonym: Tery_0695

Alternate gene names: NA

Gene position: 1130219-1129992 (Counterclockwise)

Preceding gene: 113474547

Following gene: 113474536

Centisome position: 14.58

GC content: 39.47

Gene sequence:

>228_bases
ATGCCATATTCTAGTAGCTTGACAGATGAGGAGTGGGTTATAATTGAACCCCTGTTACCCAAAAAGAAAAGAACTTTTCC
CCCCAAATGGACTAAAAGAGAAATATTGGATGGTGTTCTCTACCAACTTAAGAATGGTTGTAACTGGTGTGATTTACCCA
AGGATTTACCTCCTTATTCGACGGTATTTTGGCACTACAAACAATGGCGTATTGGAAGGGGTAATTGA

Upstream 100 bases:

>100_bases
TTCAGAATTGAATTCCAATTTTTTGAGCCATTATAACCATACATATCTAAATATATAGAAGCCATTTGGGATCTTTCTGA
AAGACTATAATGGATAGAAA

Downstream 100 bases:

>100_bases
GAAGATTAGAGATGTTTTACATGGACAACTGCGTCAAAAGGTAAAAAAAAAAGCGCTCCGGGACAACTTTAATCATCATT
GACTCACAAGCAGTCAAAAA

Product: IS5 family transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; Transposase Of; IS5 Family Transposase; Transposase And Inactivated Derivatives-Like

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MPYSSSLTDEEWVIIEPLLPKKKRTFPPKWTKREILDGVLYQLKNGCNWCDLPKDLPPYSTVFWHYKQWRIGRGN

Sequences:

>Translated_75_residues
MPYSSSLTDEEWVIIEPLLPKKKRTFPPKWTKREILDGVLYQLKNGCNWCDLPKDLPPYSTVFWHYKQWRIGRGN
>Mature_74_residues
PYSSSLTDEEWVIIEPLLPKKKRTFPPKWTKREILDGVLYQLKNGCNWCDLPKDLPPYSTVFWHYKQWRIGRGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9010; Mature: 8878

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYSSSLTDEEWVIIEPLLPKKKRTFPPKWTKREILDGVLYQLKNGCNWCDLPKDLPPYS
CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
TVFWHYKQWRIGRGN
CEEECCCEEECCCCC
>Mature Secondary Structure 
PYSSSLTDEEWVIIEPLLPKKKRTFPPKWTKREILDGVLYQLKNGCNWCDLPKDLPPYS
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
TVFWHYKQWRIGRGN
CEEECCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA