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The map label for this gene is ydhD [C]

Identifier: 113474526

GI number: 113474526

Start: 1108732

End: 1109067

Strand: Reverse

Name: ydhD [C]

Synonym: Tery_0677

Alternate gene names: 113474526

Gene position: 1109067-1108732 (Counterclockwise)

Preceding gene: 113474527

Following gene: 113474524

Centisome position: 14.31

GC content: 33.63

Gene sequence:

>336_bases
ATGACTCTCACACCAGAATTAAAAGCAAAAATTGATGACTTAGTTACTAAAAACAAAATTATGGTTTTTATGAAAGGTAA
TAAGTTGATGCCTCAATGTGGTTTCTCTAATAATGTAGTTCAAATATTGAATATTTTAGGAGTGACCTATGAAACTTGTG
ATGTATTAGAAAATCAAGATATTCGTACAGGGATCAAGGAGTATTCTAATTGGCCTACAATTCCTCAGGTTTACGTCGAC
GGAGAATTCTTGGGAGGTTCTGATGTGATGATTGAAATGTACAACAATAAAAAAGAAGAGCTAGAGCAAAAACTAGCAGT
TGCTTCAGCTTCCTAG

Upstream 100 bases:

>100_bases
AAAGCGATCGCCTATCACTTAAGCATATCAACTATAAATTAGGGCTAGCTAAATAGTAAATGCCGATGGCTTCCATGATC
ATCTATTTGAGGAAAGAAAT

Downstream 100 bases:

>100_bases
AAATCTCAACATTTACCGAAAAATAGAGTTTAAAATCTCGCCCCTAAGGAGGTGGCTTCTTAGTTGTTCTTTTTTGAATA
CATTATGTTATGTATGTTAA

Product: glutaredoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MTLTPELKAKIDDLVTKNKIMVFMKGNKLMPQCGFSNNVVQILNILGVTYETCDVLENQDIRTGIKEYSNWPTIPQVYVD
GEFLGGSDVMIEMYNNKKEELEQKLAVASAS

Sequences:

>Translated_111_residues
MTLTPELKAKIDDLVTKNKIMVFMKGNKLMPQCGFSNNVVQILNILGVTYETCDVLENQDIRTGIKEYSNWPTIPQVYVD
GEFLGGSDVMIEMYNNKKEELEQKLAVASAS
>Mature_110_residues
TLTPELKAKIDDLVTKNKIMVFMKGNKLMPQCGFSNNVVQILNILGVTYETCDVLENQDIRTGIKEYSNWPTIPQVYVDG
EFLGGSDVMIEMYNNKKEELEQKLAVASAS

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=104, Percent_Identity=53.8461538461538, Blast_Score=115, Evalue=5e-27,
Organism=Homo sapiens, GI95113651, Length=92, Percent_Identity=50, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1787943, Length=94, Percent_Identity=45.7446808510638, Blast_Score=100, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17556042, Length=91, Percent_Identity=47.2527472527472, Blast_Score=102, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI71988153, Length=86, Percent_Identity=46.5116279069767, Blast_Score=99, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI71988159, Length=92, Percent_Identity=44.5652173913043, Blast_Score=99, Evalue=4e-22,
Organism=Saccharomyces cerevisiae, GI6325198, Length=99, Percent_Identity=41.4141414141414, Blast_Score=92, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6321022, Length=99, Percent_Identity=36.3636363636364, Blast_Score=86, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6320303, Length=100, Percent_Identity=37, Blast_Score=86, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24642023, Length=89, Percent_Identity=53.9325842696629, Blast_Score=121, Evalue=1e-28,
Organism=Drosophila melanogaster, GI19921242, Length=99, Percent_Identity=43.4343434343434, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 12494; Mature: 12362

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTPELKAKIDDLVTKNKIMVFMKGNKLMPQCGFSNNVVQILNILGVTYETCDVLENQD
CCCCHHHHHHHHHHHCCCEEEEEEECCEECCCCCCCCCHHHHHHHHCCCHHHHHHHCCCC
IRTGIKEYSNWPTIPQVYVDGEFLGGSDVMIEMYNNKKEELEQKLAVASAS
HHHHHHHHCCCCCCCEEEECCEEECCCCEEEEECCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLTPELKAKIDDLVTKNKIMVFMKGNKLMPQCGFSNNVVQILNILGVTYETCDVLENQD
CCCHHHHHHHHHHHCCCEEEEEEECCEECCCCCCCCCHHHHHHHHCCCHHHHHHHCCCC
IRTGIKEYSNWPTIPQVYVDGEFLGGSDVMIEMYNNKKEELEQKLAVASAS
HHHHHHHHCCCCCCCEEEECCEEECCCCEEEEECCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]