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The map label for this gene is 113474492

Identifier: 113474492

GI number: 113474492

Start: 1041863

End: 1042810

Strand: Reverse

Name: 113474492

Synonym: Tery_0639

Alternate gene names: NA

Gene position: 1042810-1041863 (Counterclockwise)

Preceding gene: 113474494

Following gene: 113474486

Centisome position: 13.46

GC content: 34.92

Gene sequence:

>948_bases
GTGAGTTTCATCTACACCCTGAAAACCTGGATTTTAGAAAAATGCTTTCCCGTCATTGCACTCACGGGTATCAGTGGTAT
CGGTAAAACTACATTAGCGGTAAAACTCATTCAACAAATAAAAGATAATTTTGACTATGTAATTTGGCGCAGCCTCAAAA
AAACCTCCAATTTTGCCGAATTTCAAGCTGACTTAATTGAGTTTTTCTCCCAGTCTCAACCACAAAATTTTCTCAAAAAC
AGACATAAACCTTTAGACTTAATCAAATATTTACAGAAGCATCACTGTTTAGTTGTCTTGGATAACATTCATAACCTATT
CAGCAGTGGGGAGTTAGCTGGAAAGTACAAACCAGGATACGAAGAATATGACTACTTTTTCCAACAGATAGAAAAACTAT
CTCATCAAAGTTGCCTGTTATTAATAGGTTGGGAACCCATTAAACTGCTCCAACTCAAAAGCAAGAAAACTATCATTCCT
ATTTTGCAACTGACTGGTTTAGATATCAAAAGCGCCAAAGAAATACTCATAAATTATGGTTTGGCAAAAATTGAACATTC
AGAAAAACTCATTCATCTCTATCAAGGCAACCCTCTATGGTTAAAAATTGTAGCGACTCAAATTCAAGAATTGGAAGAAA
GTTTGATTGAGTTATTGCCCAGTGATATCATCTTATTGCCAGAATATTTGAAAGATAACTTACAACAGCAATGCGATCGC
CTTTCCCAAGCAGAAAAATACACTCTGTCACTTTTAGCCACAAAAAATCAACCTATTAGTTTGGCGAAACTTTTAGAAAC
TACAGAAACGTCGCCATCAGCTTTACTCAACATATTACAATCTTTGTGTCGTCGTTCCCTGATCGAAAAACAAGAAAATC
TCTACAGTCTGCCATCTATACTAAAAGAATATTATACAGAGAATAAATTCACGCTTAATATAGTATGA

Upstream 100 bases:

>100_bases
ACATTAGTTAACTCTAGATCTATGTTAGACATCTTTCTATAATTGCCTATAAATTAATGTTTTGCCTACTCAAAAACTTC
CAGTTTTGTCGATATTTTGT

Downstream 100 bases:

>100_bases
TTTAAAAAAAATATCACAATTTAGAAATAAGACCTAATTATATAATGATCTATTTATAATTCTATAATTACTTAAATCTT
CAATTTCCCCTACTCCCCAC

Product: WD repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MSFIYTLKTWILEKCFPVIALTGISGIGKTTLAVKLIQQIKDNFDYVIWRSLKKTSNFAEFQADLIEFFSQSQPQNFLKN
RHKPLDLIKYLQKHHCLVVLDNIHNLFSSGELAGKYKPGYEEYDYFFQQIEKLSHQSCLLLIGWEPIKLLQLKSKKTIIP
ILQLTGLDIKSAKEILINYGLAKIEHSEKLIHLYQGNPLWLKIVATQIQELEESLIELLPSDIILLPEYLKDNLQQQCDR
LSQAEKYTLSLLATKNQPISLAKLLETTETSPSALLNILQSLCRRSLIEKQENLYSLPSILKEYYTENKFTLNIV

Sequences:

>Translated_315_residues
MSFIYTLKTWILEKCFPVIALTGISGIGKTTLAVKLIQQIKDNFDYVIWRSLKKTSNFAEFQADLIEFFSQSQPQNFLKN
RHKPLDLIKYLQKHHCLVVLDNIHNLFSSGELAGKYKPGYEEYDYFFQQIEKLSHQSCLLLIGWEPIKLLQLKSKKTIIP
ILQLTGLDIKSAKEILINYGLAKIEHSEKLIHLYQGNPLWLKIVATQIQELEESLIELLPSDIILLPEYLKDNLQQQCDR
LSQAEKYTLSLLATKNQPISLAKLLETTETSPSALLNILQSLCRRSLIEKQENLYSLPSILKEYYTENKFTLNIV
>Mature_314_residues
SFIYTLKTWILEKCFPVIALTGISGIGKTTLAVKLIQQIKDNFDYVIWRSLKKTSNFAEFQADLIEFFSQSQPQNFLKNR
HKPLDLIKYLQKHHCLVVLDNIHNLFSSGELAGKYKPGYEEYDYFFQQIEKLSHQSCLLLIGWEPIKLLQLKSKKTIIPI
LQLTGLDIKSAKEILINYGLAKIEHSEKLIHLYQGNPLWLKIVATQIQELEESLIELLPSDIILLPEYLKDNLQQQCDRL
SQAEKYTLSLLATKNQPISLAKLLETTETSPSALLNILQSLCRRSLIEKQENLYSLPSILKEYYTENKFTLNIV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 15 WD repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000767
- InterPro:   IPR020472
- InterPro:   IPR002182
- InterPro:   IPR015943
- InterPro:   IPR001680
- InterPro:   IPR011046
- InterPro:   IPR019782
- InterPro:   IPR019775
- InterPro:   IPR017986
- InterPro:   IPR019781 [H]

Pfam domain/function: PF00931 NB-ARC; PF00400 WD40 [H]

EC number: NA

Molecular weight: Translated: 36419; Mature: 36288

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFIYTLKTWILEKCFPVIALTGISGIGKTTLAVKLIQQIKDNFDYVIWRSLKKTSNFAE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHH
FQADLIEFFSQSQPQNFLKNRHKPLDLIKYLQKHHCLVVLDNIHNLFSSGELAGKYKPGY
HHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHCCEEEEEHHHHHHHCCCCCCCCCCCCH
EEYDYFFQQIEKLSHQSCLLLIGWEPIKLLQLKSKKTIIPILQLTGLDIKSAKEILINYG
HHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCEEHHHHHCCCCHHHHHHHHHHHH
LAKIEHSEKLIHLYQGNPLWLKIVATQIQELEESLIELLPSDIILLPEYLKDNLQQQCDR
HHHHCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHH
LSQAEKYTLSLLATKNQPISLAKLLETTETSPSALLNILQSLCRRSLIEKQENLYSLPSI
HHHHHHHHHHEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKEYYTENKFTLNIV
HHHHHCCCCEEEEEC
>Mature Secondary Structure 
SFIYTLKTWILEKCFPVIALTGISGIGKTTLAVKLIQQIKDNFDYVIWRSLKKTSNFAE
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHH
FQADLIEFFSQSQPQNFLKNRHKPLDLIKYLQKHHCLVVLDNIHNLFSSGELAGKYKPGY
HHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHCCEEEEEHHHHHHHCCCCCCCCCCCCH
EEYDYFFQQIEKLSHQSCLLLIGWEPIKLLQLKSKKTIIPILQLTGLDIKSAKEILINYG
HHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCEEHHHHHCCCCHHHHHHHHHHHH
LAKIEHSEKLIHLYQGNPLWLKIVATQIQELEESLIELLPSDIILLPEYLKDNLQQQCDR
HHHHCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHH
LSQAEKYTLSLLATKNQPISLAKLLETTETSPSALLNILQSLCRRSLIEKQENLYSLPSI
HHHHHHHHHHEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKEYYTENKFTLNIV
HHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]