Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
---|---|
Accession | NC_008312 |
Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113474486
Identifier: 113474486
GI number: 113474486
Start: 1033514
End: 1033714
Strand: Reverse
Name: 113474486
Synonym: Tery_0632
Alternate gene names: NA
Gene position: 1033714-1033514 (Counterclockwise)
Preceding gene: 113474492
Following gene: 113474485
Centisome position: 13.34
GC content: 25.37
Gene sequence:
>201_bases TTGATGAAACCTTATTCTATAGACTTAAGAAAAAAAATTATCGAAATTTGGGAAAAAGAAAAAATTTCCATAAGAAAACT AGCTCAAAGGTTTGGAGTTAGTAAAAGTTTTATTCAAAAATTAATCAAAAAATATCAAGAAACTGGAGATATTAGACCTT TAACTCGAGGAGGAAGTATTCCTTCTAAATTAAATAGTTAA
Upstream 100 bases:
>100_bases GTGGTAAATGCCAAACTGGATTTAACTAGATATAGTAATTCCCAGAGTCTAATGGTAGACTAAGAGGTATAGTATTTATG GCCATAAATTTAAAATAAAA
Downstream 100 bases:
>100_bases GAATTATTAATCTTAATAGAAATAATGGATAAAAATAATCATTTAACTAATGAATAATTATGTAATTTAATGGAGGCTGC CACAGAAGTTAAAGAGAGAA
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 66; Mature: 66
Protein sequence:
>66_residues MMKPYSIDLRKKIIEIWEKEKISIRKLAQRFGVSKSFIQKLIKKYQETGDIRPLTRGGSIPSKLNS
Sequences:
>Translated_66_residues MMKPYSIDLRKKIIEIWEKEKISIRKLAQRFGVSKSFIQKLIKKYQETGDIRPLTRGGSIPSKLNS >Mature_66_residues MMKPYSIDLRKKIIEIWEKEKISIRKLAQRFGVSKSFIQKLIKKYQETGDIRPLTRGGSIPSKLNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7722; Mature: 7722
Theoretical pI: Translated: 11.05; Mature: 11.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKPYSIDLRKKIIEIWEKEKISIRKLAQRFGVSKSFIQKLIKKYQETGDIRPLTRGGSI CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCC PSKLNS CCCCCC >Mature Secondary Structure MMKPYSIDLRKKIIEIWEKEKISIRKLAQRFGVSKSFIQKLIKKYQETGDIRPLTRGGSI CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCC PSKLNS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA