Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474486

Identifier: 113474486

GI number: 113474486

Start: 1033514

End: 1033714

Strand: Reverse

Name: 113474486

Synonym: Tery_0632

Alternate gene names: NA

Gene position: 1033714-1033514 (Counterclockwise)

Preceding gene: 113474492

Following gene: 113474485

Centisome position: 13.34

GC content: 25.37

Gene sequence:

>201_bases
TTGATGAAACCTTATTCTATAGACTTAAGAAAAAAAATTATCGAAATTTGGGAAAAAGAAAAAATTTCCATAAGAAAACT
AGCTCAAAGGTTTGGAGTTAGTAAAAGTTTTATTCAAAAATTAATCAAAAAATATCAAGAAACTGGAGATATTAGACCTT
TAACTCGAGGAGGAAGTATTCCTTCTAAATTAAATAGTTAA

Upstream 100 bases:

>100_bases
GTGGTAAATGCCAAACTGGATTTAACTAGATATAGTAATTCCCAGAGTCTAATGGTAGACTAAGAGGTATAGTATTTATG
GCCATAAATTTAAAATAAAA

Downstream 100 bases:

>100_bases
GAATTATTAATCTTAATAGAAATAATGGATAAAAATAATCATTTAACTAATGAATAATTATGTAATTTAATGGAGGCTGC
CACAGAAGTTAAAGAGAGAA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MMKPYSIDLRKKIIEIWEKEKISIRKLAQRFGVSKSFIQKLIKKYQETGDIRPLTRGGSIPSKLNS

Sequences:

>Translated_66_residues
MMKPYSIDLRKKIIEIWEKEKISIRKLAQRFGVSKSFIQKLIKKYQETGDIRPLTRGGSIPSKLNS
>Mature_66_residues
MMKPYSIDLRKKIIEIWEKEKISIRKLAQRFGVSKSFIQKLIKKYQETGDIRPLTRGGSIPSKLNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7722; Mature: 7722

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKPYSIDLRKKIIEIWEKEKISIRKLAQRFGVSKSFIQKLIKKYQETGDIRPLTRGGSI
CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
PSKLNS
CCCCCC
>Mature Secondary Structure
MMKPYSIDLRKKIIEIWEKEKISIRKLAQRFGVSKSFIQKLIKKYQETGDIRPLTRGGSI
CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
PSKLNS
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA