Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113474450
Identifier: 113474450
GI number: 113474450
Start: 955170
End: 955334
Strand: Reverse
Name: 113474450
Synonym: Tery_0594
Alternate gene names: NA
Gene position: 955334-955170 (Counterclockwise)
Preceding gene: 113474451
Following gene: 113474448
Centisome position: 12.33
GC content: 36.97
Gene sequence:
>165_bases GTGACTAAAGAAAGTGCAACTTTTGTGGTAGGAAATCCAGAAATAGTAGCAAATATTATTGGGCCAACTGAAGCTTATGC TCAACTCAAAAAAGATGATAATACTTTAGTATTCAGCTTTCTTGGAATTAGCCAGGAAGCTCTCTGGATGTGGCCACAAA GATAA
Upstream 100 bases:
>100_bases TACTAACTTAACATGGGTAGCATTGCTACAAAAAAATTAGATTAAAGGGAAAATATTTTGAGAAATTATTGTCAATATTA CTTCTATTTATGATTTTCCT
Downstream 100 bases:
>100_bases AAGTTTTGTAGTAAAAACAAGTTAAAACACTCATACAACTGAAAAGTGCTACTGGTAAAACAAGCTTTTAGGAGGTATTG CTTTTTCCTTTAATGGGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 54; Mature: 53
Protein sequence:
>54_residues MTKESATFVVGNPEIVANIIGPTEAYAQLKKDDNTLVFSFLGISQEALWMWPQR
Sequences:
>Translated_54_residues MTKESATFVVGNPEIVANIIGPTEAYAQLKKDDNTLVFSFLGISQEALWMWPQR >Mature_53_residues TKESATFVVGNPEIVANIIGPTEAYAQLKKDDNTLVFSFLGISQEALWMWPQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6057; Mature: 5926
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKESATFVVGNPEIVANIIGPTEAYAQLKKDDNTLVFSFLGISQEALWMWPQR CCCCCCEEEEECCCEEEEECCCCHHHHEECCCCCEEEEEEECCCCCEEEECCCC >Mature Secondary Structure TKESATFVVGNPEIVANIIGPTEAYAQLKKDDNTLVFSFLGISQEALWMWPQR CCCCCEEEEECCCEEEEECCCCHHHHEECCCCCEEEEEEECCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA