Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474451

Identifier: 113474451

GI number: 113474451

Start: 955607

End: 957274

Strand: Reverse

Name: 113474451

Synonym: Tery_0595

Alternate gene names: NA

Gene position: 957274-955607 (Counterclockwise)

Preceding gene: 113474452

Following gene: 113474450

Centisome position: 12.35

GC content: 37.05

Gene sequence:

>1668_bases
ATGAAAAAGCAAGATAAAATCTTACCTTTAACCATAATAGGATCAGCCATATTAATAATTGTCGGTAGTGTCACCGCCTA
CATGGGAATGTATAGGAAAGAAACAGTTAAAAATTTACCTGTGGGTGCTGAGGTTCTCCCCCAGGATACAATGATAACTT
TACATGTTTCTACTGACTATAATCAATGGAAAAAATTACAAGAGTTTGGTACTTCTGAGTCAAAAACTGCTTTCCAAAAG
TTTTTAGGGAATTTGCGCGATCGCTTCCTAACTACTTATGGTTATAATTATCAACGAGATATTAAACCTTGGGTAGGCAA
GGAAGTAGCGATCGCTTTCTTACGCCAATCTACTCTTGAACCCAGTAACGAAAATATCCCCGGTTCTTCACCACCCCCTC
CGGCTCAACAAGCAACTATGGTGGTATTGCCGATCGCTGATCCAATTGCAGCTAAAAAAATTTTAGATAAACCGCCCTCT
CTTAATGAAGGTAAATTAGTTAAACGTACCTACAGAGGTATTGAAATTACAGAAACTCAAGAAGTAGCTAGCCAAGATTT
TTCTGTAGCAGCATTGGGAGAAAAATTTTTGGTGGTTACTAATTCTCCAAGGGCAATAAACCGAGTGGTTGATATATATA
AAGGAGACAATTCTCTAGAAAAAGCTCCGGGTTTAACTCAAGCAATTAATAAATTGGAAACTGCTCCATCTTTTGCTAAG
GTATATGTGAATATCCCTGCTGCTGCTGCTTATACCTCTAGTAAATCTGTTACTTCTCTTTCTGAGGAAAATCTCAGACA
ATTTGAGGATAACCAGGGAATAGCAGCAACTTTAAACTTAGTTCCTGAAGGTATAAATTTAAAAGCAGTTTCTTGGCTTA
AACCTAATAGCCAGAAAAAGTTTACTGTAGAAAATAATGCTACAGAAATGTTAGATAAGGTTCCTGGAAATGCTTTAATG
ATGCTATCTGGCAGTAATTTACAGCGAATGTGGTCTGATTATGTTAAGGGTGCAGTGGCTAATCCCTTAGCACCTATTAA
CCCAGAGACATTACGTCAAAACATGAAAAATGCAACTGGCATGGATTTAGATAAGGAATTTATCAACTGGATGGGAGCAG
AGTATTCTCTATCTTTACTGCCTGTTTCTAAAGATAAGAAGCAGTTACAAAAATTTTTTGCGGGGTTTGTGTTTATGGTT
AAGGCAAGCGATCGCCGTGTAGCTGAAGACTCTCTGAAAAAATTAGATCAAGTGATGAAGAGGAATAAATTTCAGGTAGG
TGAAGCTATTGCTAGGGGAAGACCTGTGGTAAAATGGACTTCTCCATTTGGTGGGTTTACTGTAGTTCGTGGTTGGTTGA
ATGGGAATGTAGTATTTTTCACTTTAGGAGGATCTGTGGAAAATCAAATATTGCCTGCTCCGACAAATTCTATGGCGGAA
AGTGTATTTTTACAAAAAACCCTCCCATTAGAGAGAGAAGCTTGGAATGGTAATTTTTTCATTGATATTAGTCGGACTTT
CAGCAAAAAAAATCTTTCTCTTCCCCAGTTACCTGCTAATCAAAAAATTTGGGTAGATGGTATTGAGTCTATTGGAGTAA
CATCTATTATCCTTAATAATCGCACAACTAATTATGATGTGTTTGTGAAATTGAAAAAACAAAAGTAG

Upstream 100 bases:

>100_bases
TTTTGGACTTTTACCTTGCCCATAGCCCTTGTTTGGTAAAAATATTAAATATTATTATCTTTATGCCAACTTCTAATCCC
TAATTTCTACTTAGCTAAGA

Downstream 100 bases:

>100_bases
CTATAGCTTTATGAGGAAGTCAGATTTTTCTTCTGACTGTACCTCCGCAATCCAATTTTTCCTCTAAGACAATTCTCAAA
AACTTTCCTCGACTTGGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 555; Mature: 555

Protein sequence:

>555_residues
MKKQDKILPLTIIGSAILIIVGSVTAYMGMYRKETVKNLPVGAEVLPQDTMITLHVSTDYNQWKKLQEFGTSESKTAFQK
FLGNLRDRFLTTYGYNYQRDIKPWVGKEVAIAFLRQSTLEPSNENIPGSSPPPPAQQATMVVLPIADPIAAKKILDKPPS
LNEGKLVKRTYRGIEITETQEVASQDFSVAALGEKFLVVTNSPRAINRVVDIYKGDNSLEKAPGLTQAINKLETAPSFAK
VYVNIPAAAAYTSSKSVTSLSEENLRQFEDNQGIAATLNLVPEGINLKAVSWLKPNSQKKFTVENNATEMLDKVPGNALM
MLSGSNLQRMWSDYVKGAVANPLAPINPETLRQNMKNATGMDLDKEFINWMGAEYSLSLLPVSKDKKQLQKFFAGFVFMV
KASDRRVAEDSLKKLDQVMKRNKFQVGEAIARGRPVVKWTSPFGGFTVVRGWLNGNVVFFTLGGSVENQILPAPTNSMAE
SVFLQKTLPLEREAWNGNFFIDISRTFSKKNLSLPQLPANQKIWVDGIESIGVTSIILNNRTTNYDVFVKLKKQK

Sequences:

>Translated_555_residues
MKKQDKILPLTIIGSAILIIVGSVTAYMGMYRKETVKNLPVGAEVLPQDTMITLHVSTDYNQWKKLQEFGTSESKTAFQK
FLGNLRDRFLTTYGYNYQRDIKPWVGKEVAIAFLRQSTLEPSNENIPGSSPPPPAQQATMVVLPIADPIAAKKILDKPPS
LNEGKLVKRTYRGIEITETQEVASQDFSVAALGEKFLVVTNSPRAINRVVDIYKGDNSLEKAPGLTQAINKLETAPSFAK
VYVNIPAAAAYTSSKSVTSLSEENLRQFEDNQGIAATLNLVPEGINLKAVSWLKPNSQKKFTVENNATEMLDKVPGNALM
MLSGSNLQRMWSDYVKGAVANPLAPINPETLRQNMKNATGMDLDKEFINWMGAEYSLSLLPVSKDKKQLQKFFAGFVFMV
KASDRRVAEDSLKKLDQVMKRNKFQVGEAIARGRPVVKWTSPFGGFTVVRGWLNGNVVFFTLGGSVENQILPAPTNSMAE
SVFLQKTLPLEREAWNGNFFIDISRTFSKKNLSLPQLPANQKIWVDGIESIGVTSIILNNRTTNYDVFVKLKKQK
>Mature_555_residues
MKKQDKILPLTIIGSAILIIVGSVTAYMGMYRKETVKNLPVGAEVLPQDTMITLHVSTDYNQWKKLQEFGTSESKTAFQK
FLGNLRDRFLTTYGYNYQRDIKPWVGKEVAIAFLRQSTLEPSNENIPGSSPPPPAQQATMVVLPIADPIAAKKILDKPPS
LNEGKLVKRTYRGIEITETQEVASQDFSVAALGEKFLVVTNSPRAINRVVDIYKGDNSLEKAPGLTQAINKLETAPSFAK
VYVNIPAAAAYTSSKSVTSLSEENLRQFEDNQGIAATLNLVPEGINLKAVSWLKPNSQKKFTVENNATEMLDKVPGNALM
MLSGSNLQRMWSDYVKGAVANPLAPINPETLRQNMKNATGMDLDKEFINWMGAEYSLSLLPVSKDKKQLQKFFAGFVFMV
KASDRRVAEDSLKKLDQVMKRNKFQVGEAIARGRPVVKWTSPFGGFTVVRGWLNGNVVFFTLGGSVENQILPAPTNSMAE
SVFLQKTLPLEREAWNGNFFIDISRTFSKKNLSLPQLPANQKIWVDGIESIGVTSIILNNRTTNYDVFVKLKKQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61669; Mature: 61669

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQDKILPLTIIGSAILIIVGSVTAYMGMYRKETVKNLPVGAEVLPQDTMITLHVSTDY
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEEEEECCH
NQWKKLQEFGTSESKTAFQKFLGNLRDRFLTTYGYNYQRDIKPWVGKEVAIAFLRQSTLE
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCC
PSNENIPGSSPPPPAQQATMVVLPIADPIAAKKILDKPPSLNEGKLVKRTYRGIEITETQ
CCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHCCCEEECHH
EVASQDFSVAALGEKFLVVTNSPRAINRVVDIYKGDNSLEKAPGLTQAINKLETAPSFAK
HHHHCCCEEEECCCEEEEEECCCHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHCCCCEEE
VYVNIPAAAAYTSSKSVTSLSEENLRQFEDNQGIAATLNLVPEGINLKAVSWLKPNSQKK
EEEECCCHHEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEECCCCCCE
FTVENNATEMLDKVPGNALMMLSGSNLQRMWSDYVKGAVANPLAPINPETLRQNMKNATG
EEECCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHCCCC
MDLDKEFINWMGAEYSLSLLPVSKDKKQLQKFFAGFVFMVKASDRRVAEDSLKKLDQVMK
CCCCHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHH
RNKFQVGEAIARGRPVVKWTSPFGGFTVVRGWLNGNVVFFTLGGSVENQILPAPTNSMAE
CCCHHHHHHHHCCCCEEEECCCCCCEEEEEEEECCCEEEEEECCCCCCCEECCCCHHHHH
SVFLQKTLPLEREAWNGNFFIDISRTFSKKNLSLPQLPANQKIWVDGIESIGVTSIILNN
HHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECC
RTTNYDVFVKLKKQK
CCCCEEEEEEEECCC
>Mature Secondary Structure
MKKQDKILPLTIIGSAILIIVGSVTAYMGMYRKETVKNLPVGAEVLPQDTMITLHVSTDY
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEEEEECCH
NQWKKLQEFGTSESKTAFQKFLGNLRDRFLTTYGYNYQRDIKPWVGKEVAIAFLRQSTLE
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCC
PSNENIPGSSPPPPAQQATMVVLPIADPIAAKKILDKPPSLNEGKLVKRTYRGIEITETQ
CCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHCCCEEECHH
EVASQDFSVAALGEKFLVVTNSPRAINRVVDIYKGDNSLEKAPGLTQAINKLETAPSFAK
HHHHCCCEEEECCCEEEEEECCCHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHCCCCEEE
VYVNIPAAAAYTSSKSVTSLSEENLRQFEDNQGIAATLNLVPEGINLKAVSWLKPNSQKK
EEEECCCHHEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEECCCCCCE
FTVENNATEMLDKVPGNALMMLSGSNLQRMWSDYVKGAVANPLAPINPETLRQNMKNATG
EEECCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHCCCC
MDLDKEFINWMGAEYSLSLLPVSKDKKQLQKFFAGFVFMVKASDRRVAEDSLKKLDQVMK
CCCCHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHH
RNKFQVGEAIARGRPVVKWTSPFGGFTVVRGWLNGNVVFFTLGGSVENQILPAPTNSMAE
CCCHHHHHHHHCCCCEEEECCCCCCEEEEEEEECCCEEEEEECCCCCCCEECCCCHHHHH
SVFLQKTLPLEREAWNGNFFIDISRTFSKKNLSLPQLPANQKIWVDGIESIGVTSIILNN
HHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECC
RTTNYDVFVKLKKQK
CCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA