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The map label for this gene is cphB [H]

Identifier: 113474448

GI number: 113474448

Start: 952466

End: 953506

Strand: Reverse

Name: cphB [H]

Synonym: Tery_0592

Alternate gene names: 113474448

Gene position: 953506-952466 (Counterclockwise)

Preceding gene: 113474450

Following gene: 113474446

Centisome position: 12.3

GC content: 37.66

Gene sequence:

>1041_bases
ATGAGGTTTCTTTTCTTGTTAAATTTGTTTTTAACTTCTTTATTTAACAAATCACTAAAAGCAACATTAGTTTTATTCTT
AATAGTTGCTACAGTATTAGTTTTTCTTCCCCAGGTAAAAAGCTACGGTTATTTAGAGAACAATTCTGCTGATCTTGGTC
TACAACATGCTGGTCCAGTTTACGATCTAGGTGGTGGTGGTCGTGATGTGGACGAAGCAATTCAGTGGATGATTAATGAA
GTCCGAGGATGCTATTCTTGTGAGAAGAAAGTAGATGTGGTTATAATTCGTAACTCCGGTAGTGATGCTTATAATGAAGC
AATTCTGGCTATGGATGGGGTAAGCTCGGCCAAGACTTTGATTATTTCAGATCGAGAGGAGGCTACAAGAGAGAATGTTG
TAGAAGATATTGAGGATGCTGAAGTAATTTTCTTTGCTGGTGGCGACCAGTGTCAATATTTGCGGAACTATCTAAACACG
GGAGTTGATGGAGCTATTAAATCTGTCATTGCTAGAGGTGGAGCAGTTGGTGGGACTAGTGCTGGAGCAATGATTCAAAG
TGATTTTGTCTTCAATGCTTGTTCTGATAAAGTTATCAGTGAAACTGCATTGGAAAGTCCATACGAGGATATTACTCTTA
ATCAAGATTTTTTTTATTGGGAGAATTTGCAGGATACTATTATAGATACCCATTTCTCTGAACGCGATCGCATGGGTCGG
TTGATGACGTTTGTTGCTCGTTTACTCAGGGATGGAAGGGCTTCTGATGCTTTAGGTATTGGTGTTGATGAAAATACTTC
CTTAATTGTGGATCAAAATGGTTTGGCCGAAGTAGTAGGGGTAAGAGATGGGTTTGTTTATTTTGTCTCAGGAGACCATC
TGCCAGAGAAATGTGAACCTCAAACTCCACTAACTTTTAGTAGGTTTAAAATTTGGAAAAGGGGAAATGGTGAAACTTTT
GATTTGAGAAATAGAGCATTAAATGATGATTATTATGAGGTTAGTGTTGAGAATGGAAAAATAGATTCAAATCCTTATTA
A

Upstream 100 bases:

>100_bases
TTGGTTATCTTTAAGTAAAAAAAATGAATGGTGAAAATAGTTGATGATAGCTAATGATTGAAATAAAATTATCTTAGTAT
TAGTATCTAGGAATCTATTG

Downstream 100 bases:

>100_bases
AGAAGGAATTCAACAGTAGGAGCGTTTCATAAATTAGGGACGCTGCATGCAACGTCCCTACAGAATTATCATTTGACCCC
AGTTTCTACTATTAGAATTT

Product: peptidase S51, dipeptidase E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MRFLFLLNLFLTSLFNKSLKATLVLFLIVATVLVFLPQVKSYGYLENNSADLGLQHAGPVYDLGGGGRDVDEAIQWMINE
VRGCYSCEKKVDVVIIRNSGSDAYNEAILAMDGVSSAKTLIISDREEATRENVVEDIEDAEVIFFAGGDQCQYLRNYLNT
GVDGAIKSVIARGGAVGGTSAGAMIQSDFVFNACSDKVISETALESPYEDITLNQDFFYWENLQDTIIDTHFSERDRMGR
LMTFVARLLRDGRASDALGIGVDENTSLIVDQNGLAEVVGVRDGFVYFVSGDHLPEKCEPQTPLTFSRFKIWKRGNGETF
DLRNRALNDDYYEVSVENGKIDSNPY

Sequences:

>Translated_346_residues
MRFLFLLNLFLTSLFNKSLKATLVLFLIVATVLVFLPQVKSYGYLENNSADLGLQHAGPVYDLGGGGRDVDEAIQWMINE
VRGCYSCEKKVDVVIIRNSGSDAYNEAILAMDGVSSAKTLIISDREEATRENVVEDIEDAEVIFFAGGDQCQYLRNYLNT
GVDGAIKSVIARGGAVGGTSAGAMIQSDFVFNACSDKVISETALESPYEDITLNQDFFYWENLQDTIIDTHFSERDRMGR
LMTFVARLLRDGRASDALGIGVDENTSLIVDQNGLAEVVGVRDGFVYFVSGDHLPEKCEPQTPLTFSRFKIWKRGNGETF
DLRNRALNDDYYEVSVENGKIDSNPY
>Mature_346_residues
MRFLFLLNLFLTSLFNKSLKATLVLFLIVATVLVFLPQVKSYGYLENNSADLGLQHAGPVYDLGGGGRDVDEAIQWMINE
VRGCYSCEKKVDVVIIRNSGSDAYNEAILAMDGVSSAKTLIISDREEATRENVVEDIEDAEVIFFAGGDQCQYLRNYLNT
GVDGAIKSVIARGGAVGGTSAGAMIQSDFVFNACSDKVISETALESPYEDITLNQDFFYWENLQDTIIDTHFSERDRMGR
LMTFVARLLRDGRASDALGIGVDENTSLIVDQNGLAEVVGVRDGFVYFVSGDHLPEKCEPQTPLTFSRFKIWKRGNGETF
DLRNRALNDDYYEVSVENGKIDSNPY

Specific function: Exopeptidase that catalyzes the hydrolytic cleavage of multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides [H]

COG id: COG4242

COG function: function code QP; Cyanophycinase and related exopeptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S51 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005320
- InterPro:   IPR011811 [H]

Pfam domain/function: PF03575 Peptidase_S51 [H]

EC number: =3.4.15.6 [H]

Molecular weight: Translated: 38388; Mature: 38388

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLFLLNLFLTSLFNKSLKATLVLFLIVATVLVFLPQVKSYGYLENNSADLGLQHAGPV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCE
YDLGGGGRDVDEAIQWMINEVRGCYSCEKKVDVVIIRNSGSDAYNEAILAMDGVSSAKTL
EECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHCEEEEECCCCCCEEE
IISDREEATRENVVEDIEDAEVIFFAGGDQCQYLRNYLNTGVDGAIKSVIARGGAVGGTS
EEECCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
AGAMIQSDFVFNACSDKVISETALESPYEDITLNQDFFYWENLQDTIIDTHFSERDRMGR
CCCEEECCCCHHHHHHHHHHHHHHCCCCCCEECCCCEEEECCCHHHHHHCCCHHHHHHHH
LMTFVARLLRDGRASDALGIGVDENTSLIVDQNGLAEVVGVRDGFVYFVSGDHLPEKCEP
HHHHHHHHHHCCCCCCCEEECCCCCCEEEEECCCCCCEEECCCCEEEEEECCCCCCCCCC
QTPLTFSRFKIWKRGNGETFDLRNRALNDDYYEVSVENGKIDSNPY
CCCCCHHHEEEEECCCCCEEEHHHHCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MRFLFLLNLFLTSLFNKSLKATLVLFLIVATVLVFLPQVKSYGYLENNSADLGLQHAGPV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCE
YDLGGGGRDVDEAIQWMINEVRGCYSCEKKVDVVIIRNSGSDAYNEAILAMDGVSSAKTL
EECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHCEEEEECCCCCCEEE
IISDREEATRENVVEDIEDAEVIFFAGGDQCQYLRNYLNTGVDGAIKSVIARGGAVGGTS
EEECCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
AGAMIQSDFVFNACSDKVISETALESPYEDITLNQDFFYWENLQDTIIDTHFSERDRMGR
CCCEEECCCCHHHHHHHHHHHHHHCCCCCCEECCCCEEEECCCHHHHHHCCCHHHHHHHH
LMTFVARLLRDGRASDALGIGVDENTSLIVDQNGLAEVVGVRDGFVYFVSGDHLPEKCEP
HHHHHHHHHHCCCCCCCEEECCCCCCEEEEECCCCCCEEECCCCEEEEEECCCCCCCCCC
QTPLTFSRFKIWKRGNGETFDLRNRALNDDYYEVSVENGKIDSNPY
CCCCCHHHEEEEECCCCCEEEHHHHCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9652408 [H]