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The map label for this gene is 113474446

Identifier: 113474446

GI number: 113474446

Start: 947925

End: 949313

Strand: Reverse

Name: 113474446

Synonym: Tery_0590

Alternate gene names: NA

Gene position: 949313-947925 (Counterclockwise)

Preceding gene: 113474448

Following gene: 113474442

Centisome position: 12.25

GC content: 38.08

Gene sequence:

>1389_bases
ATGGAATTCCAAGAATTATTAACTTGGGCAGAGCAGCAGGTTTTGGCCCACACTGGAAAACCTTTAGACGACCTCCAAAA
AGCTATTTTGTGTGGCACCTGGGAACGTGAAAAATACTCCCATATCGCTAAGTCCTATCATTGTACTGAGGTTCATGTAA
AAAAGGTTGCTTCTCTCTTGTGGAAAACACTCTCACAAAGTTTAGGAGATGGAAAACAAATAAATAAATCAAATTTGCGT
TCGACATTCCAAAGGTGGCGAGTTTCAAATATCTCACATTTCAGAGATATCCCACATATCAGTCATGTCAGCGTCTGCGG
AAACACCTCATATCGACCAGCAGTTATCAAGCAACAACAGAGCGATCGCTTTCAACCCCCAAATAACAGCAAACCCCATA
TAGATCGCTCCGAAGCACCAGACCTAGAATATGATTGCGATCGCCCCGCAGAACTGGCTACCCTAAAAAACCTGCTCCTC
AAAAAACGGAGTCGTCTAGTAGCCATTTCCGGAATTAGCGGCATAGGGAAAACAGCGATCGCCCTTCAATTACTATCCCA
AATAGAAGATGAATTCGACCATATAATATGGCGGAGTCTTCGCGGTGCCCCGACTCCAGAAACTACCCTCAAATCTTTAA
TTCAATTTTTTGATCAAACTTTCCAAAGTCGCAAAAATCAAAAAGAAGAAGAGCAACTATCTTTAATAATAGAATACTTA
CGAAATAACCGCTGTTTAATCATATTAGATGACCTCCATCAAGTTTTAGAAAAAGATAAATTAGTTGGTCATTATCAACC
GGGATACGAAAGTTATAAAAACCTGTTTGAAACCATTGCTGAACTATCCCATCAAAGCTGTATAATTTTCAATACCTGGG
AATTACCCCTAGAAATTCTCAATTTAAAAAATAAAAATGCTCCTGTTTCCTACTTACAACTAGAAGGTTTGGGAAAAGCC
GCCAATAAAATTTTACAACAAGCAGATTTATTAGATCAAGAAAAATGGTCCGAATTAATCAATATTTATGGAGGCAACCC
CCACTGGTTAAAAATTACAGCAACAGGTATCAAAGATTTATTTGGTGGCAGGGTAGGAGAATATTTGCAGTACAAACCTC
TATTTTTAGCAGAAGAATTGACAGTTATCTTAAAACAACATTTAAGTCGGCTATCGGAATTAGAGAGTCAAATTTTACTA
CAAATTAGCCATCAAAAAGAACCAGTTTCCATATCTTGGTTGCAGGAGGGAAGCGATCGCTCCTATTCCAATATTTTGAA
TGCCATTATGTCTTTAGGAAAGCGATCGCTACTAGAAAAAATTGAAGTGCAAAAATCGACTCTATTCGTCGTCAAACCGA
TTTTTCAAGAATATTTGCTACAGCAATAA

Upstream 100 bases:

>100_bases
CTTGCCTAAGATCTTTAAAAATTGCTACAGTTGTCGAAGGTAGCATAAAGTAGGATATAGTAATCTCATCCACCACATCT
ACCAGACTCACTAAACTCTT

Downstream 100 bases:

>100_bases
CCAAGTCAAACTGTGACTTATTTACCTCTTCGTTGTTGCTCCAATACCTTACAGCCTTATTTCTAATAAACTGTGCCCTT
ATCATAGCCTCATCCAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MEFQELLTWAEQQVLAHTGKPLDDLQKAILCGTWEREKYSHIAKSYHCTEVHVKKVASLLWKTLSQSLGDGKQINKSNLR
STFQRWRVSNISHFRDIPHISHVSVCGNTSYRPAVIKQQQSDRFQPPNNSKPHIDRSEAPDLEYDCDRPAELATLKNLLL
KKRSRLVAISGISGIGKTAIALQLLSQIEDEFDHIIWRSLRGAPTPETTLKSLIQFFDQTFQSRKNQKEEEQLSLIIEYL
RNNRCLIILDDLHQVLEKDKLVGHYQPGYESYKNLFETIAELSHQSCIIFNTWELPLEILNLKNKNAPVSYLQLEGLGKA
ANKILQQADLLDQEKWSELINIYGGNPHWLKITATGIKDLFGGRVGEYLQYKPLFLAEELTVILKQHLSRLSELESQILL
QISHQKEPVSISWLQEGSDRSYSNILNAIMSLGKRSLLEKIEVQKSTLFVVKPIFQEYLLQQ

Sequences:

>Translated_462_residues
MEFQELLTWAEQQVLAHTGKPLDDLQKAILCGTWEREKYSHIAKSYHCTEVHVKKVASLLWKTLSQSLGDGKQINKSNLR
STFQRWRVSNISHFRDIPHISHVSVCGNTSYRPAVIKQQQSDRFQPPNNSKPHIDRSEAPDLEYDCDRPAELATLKNLLL
KKRSRLVAISGISGIGKTAIALQLLSQIEDEFDHIIWRSLRGAPTPETTLKSLIQFFDQTFQSRKNQKEEEQLSLIIEYL
RNNRCLIILDDLHQVLEKDKLVGHYQPGYESYKNLFETIAELSHQSCIIFNTWELPLEILNLKNKNAPVSYLQLEGLGKA
ANKILQQADLLDQEKWSELINIYGGNPHWLKITATGIKDLFGGRVGEYLQYKPLFLAEELTVILKQHLSRLSELESQILL
QISHQKEPVSISWLQEGSDRSYSNILNAIMSLGKRSLLEKIEVQKSTLFVVKPIFQEYLLQQ
>Mature_462_residues
MEFQELLTWAEQQVLAHTGKPLDDLQKAILCGTWEREKYSHIAKSYHCTEVHVKKVASLLWKTLSQSLGDGKQINKSNLR
STFQRWRVSNISHFRDIPHISHVSVCGNTSYRPAVIKQQQSDRFQPPNNSKPHIDRSEAPDLEYDCDRPAELATLKNLLL
KKRSRLVAISGISGIGKTAIALQLLSQIEDEFDHIIWRSLRGAPTPETTLKSLIQFFDQTFQSRKNQKEEEQLSLIIEYL
RNNRCLIILDDLHQVLEKDKLVGHYQPGYESYKNLFETIAELSHQSCIIFNTWELPLEILNLKNKNAPVSYLQLEGLGKA
ANKILQQADLLDQEKWSELINIYGGNPHWLKITATGIKDLFGGRVGEYLQYKPLFLAEELTVILKQHLSRLSELESQILL
QISHQKEPVSISWLQEGSDRSYSNILNAIMSLGKRSLLEKIEVQKSTLFVVKPIFQEYLLQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 15 WD repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000767
- InterPro:   IPR020472
- InterPro:   IPR002182
- InterPro:   IPR015943
- InterPro:   IPR001680
- InterPro:   IPR011046
- InterPro:   IPR019782
- InterPro:   IPR019775
- InterPro:   IPR017986
- InterPro:   IPR019781 [H]

Pfam domain/function: PF00931 NB-ARC; PF00400 WD40 [H]

EC number: NA

Molecular weight: Translated: 53133; Mature: 53133

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFQELLTWAEQQVLAHTGKPLDDLQKAILCGTWEREKYSHIAKSYHCTEVHVKKVASLL
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
WKTLSQSLGDGKQINKSNLRSTFQRWRVSNISHFRDIPHISHVSVCGNTSYRPAVIKQQQ
HHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCEEEECCCCCCCCHHHHCCH
SDRFQPPNNSKPHIDRSEAPDLEYDCDRPAELATLKNLLLKKRSRLVAISGISGIGKTAI
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHH
ALQLLSQIEDEFDHIIWRSLRGAPTPETTLKSLIQFFDQTFQSRKNQKEEEQLSLIIEYL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RNNRCLIILDDLHQVLEKDKLVGHYQPGYESYKNLFETIAELSHQSCIIFNTWELPLEIL
HCCCEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHH
NLKNKNAPVSYLQLEGLGKAANKILQQADLLDQEKWSELINIYGGNPHWLKITATGIKDL
HCCCCCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECHHHHH
FGGRVGEYLQYKPLFLAEELTVILKQHLSRLSELESQILLQISHQKEPVSISWLQEGSDR
HCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCC
SYSNILNAIMSLGKRSLLEKIEVQKSTLFVVKPIFQEYLLQQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEFQELLTWAEQQVLAHTGKPLDDLQKAILCGTWEREKYSHIAKSYHCTEVHVKKVASLL
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
WKTLSQSLGDGKQINKSNLRSTFQRWRVSNISHFRDIPHISHVSVCGNTSYRPAVIKQQQ
HHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCEEEECCCCCCCCHHHHCCH
SDRFQPPNNSKPHIDRSEAPDLEYDCDRPAELATLKNLLLKKRSRLVAISGISGIGKTAI
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHH
ALQLLSQIEDEFDHIIWRSLRGAPTPETTLKSLIQFFDQTFQSRKNQKEEEQLSLIIEYL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RNNRCLIILDDLHQVLEKDKLVGHYQPGYESYKNLFETIAELSHQSCIIFNTWELPLEIL
HCCCEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHH
NLKNKNAPVSYLQLEGLGKAANKILQQADLLDQEKWSELINIYGGNPHWLKITATGIKDL
HCCCCCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECHHHHH
FGGRVGEYLQYKPLFLAEELTVILKQHLSRLSELESQILLQISHQKEPVSISWLQEGSDR
HCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCC
SYSNILNAIMSLGKRSLLEKIEVQKSTLFVVKPIFQEYLLQQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]