The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

Click here to switch to the map view.

The map label for this gene is 113474411

Identifier: 113474411

GI number: 113474411

Start: 867047

End: 867376

Strand: Direct

Name: 113474411

Synonym: Tery_0550

Alternate gene names: NA

Gene position: 867047-867376 (Clockwise)

Preceding gene: 113474410

Following gene: 113474412

Centisome position: 11.19

GC content: 27.58

Gene sequence:

>330_bases
ATGAAATTTATCAATCCTAAAGTTGATTATGCTTTTAAAAAAATCTTTGGTTCTGAGCAAAGCAAAGAGATTTTAATTAG
TTTTCTAAATGCGATTATTTATAATGGAGAAAAAACTATTAAGGATTTAACAATTTTTAATCCTTTTAATCCTGGTGAAA
TTATTAGTTTAAAAGATACTTATTTGGATGTAAAAGCAGTTTTATTTGACTGCTCTATTGTAATTATTGAAATGCAAATG
GCACGAATGACTGCTTTTAATAAGAGGGTGGCTTACAATTTGTCTAAAGCTTATGCTAATCAGTTGGATAAAGGGGAGAA
TTATCCTTGA

Upstream 100 bases:

>100_bases
TGGCAGATGTGGAGGATTTGGTGAAGGTATTTTTAAGTTTTAATAGTTTGGCAGATTTGGAAAGTTGGTTATAGGAACGT
TTATAAGGAGCAATACTACT

Downstream 100 bases:

>100_bases
TTAAATCCGGCGATCGCTCTGACAATTACGGATTTTATTCTGTTTAAAAATACTGATAATAATATTAATAAAGATGATTA
TATTAATAAATTTGTGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MKFINPKVDYAFKKIFGSEQSKEILISFLNAIIYNGEKTIKDLTIFNPFNPGEIISLKDTYLDVKAVLFDCSIVIIEMQM
ARMTAFNKRVAYNLSKAYANQLDKGENYP

Sequences:

>Translated_109_residues
MKFINPKVDYAFKKIFGSEQSKEILISFLNAIIYNGEKTIKDLTIFNPFNPGEIISLKDTYLDVKAVLFDCSIVIIEMQM
ARMTAFNKRVAYNLSKAYANQLDKGENYP
>Mature_109_residues
MKFINPKVDYAFKKIFGSEQSKEILISFLNAIIYNGEKTIKDLTIFNPFNPGEIISLKDTYLDVKAVLFDCSIVIIEMQM
ARMTAFNKRVAYNLSKAYANQLDKGENYP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12514; Mature: 12514

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFINPKVDYAFKKIFGSEQSKEILISFLNAIIYNGEKTIKDLTIFNPFNPGEIISLKDT
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCEEEEHHH
YLDVKAVLFDCSIVIIEMQMARMTAFNKRVAYNLSKAYANQLDKGENYP
HHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKFINPKVDYAFKKIFGSEQSKEILISFLNAIIYNGEKTIKDLTIFNPFNPGEIISLKDT
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCEEEEHHH
YLDVKAVLFDCSIVIIEMQMARMTAFNKRVAYNLSKAYANQLDKGENYP
HHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA