| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113474412
Identifier: 113474412
GI number: 113474412
Start: 867470
End: 867970
Strand: Direct
Name: 113474412
Synonym: Tery_0551
Alternate gene names: NA
Gene position: 867470-867970 (Clockwise)
Preceding gene: 113474411
Following gene: 113474414
Centisome position: 11.19
GC content: 36.73
Gene sequence:
>501_bases GTGTTTCAGGAGGAAACTAAAAAGTATAAATGCTTGGAAAAAGAATTGCGGTTAATATTTGTGGAACTGCCGAAGTTTAA AAAAAGTTTGTCGGAGTTAAAAAATTTGACGGATAAGTGGATTTATTTTCTGCAAGAGGCAGCTAGCTTTGATGAAATAC CAGAGAATTTGGGGGAAGTTGCGGAAATAGAACAGGCATTAAATATGGCTAATTTTATTAATATGACTCCAGAAGAGTTA GAGATAGTTGAAAACCGAGGGATAGCTATGCAAGATGAAAGAGGACGGATAGCTTATGCAGAAGAACAAGCACGGCTTAA TCAAACGATCGCTCTTGTCAAGCTATTAATAACTCAACGTTTTGGAGAGGTTTCTGAAGGTATTAGTAGTCAGATAGAAG ATTTGCCTTTGGCAGATGTGGAAGATTTGGTGAAGGTGTTTTTAAGTTTTAATAGTTTGGCAGATTTGGAAAGTTGGTTA CAGGAACGTTTGAGGTCTTAA
Upstream 100 bases:
>100_bases TCCTTGATTAAATCCGGCGATCGCTCTGACAATTACGGATTTTATTCTGTTTAAAAATACTGATAATAATATTAATAAAG ATGATTATATTAATAAATTT
Downstream 100 bases:
>100_bases TTCAGCGCTTTTCAAATTGATAAACTACATCGCTATAACCAAAACCTTGTAGGGACGTTGCAAACACAAAAATGCGTTTC ATGTCGTATTCGCGTTACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MFQEETKKYKCLEKELRLIFVELPKFKKSLSELKNLTDKWIYFLQEAASFDEIPENLGEVAEIEQALNMANFINMTPEEL EIVENRGIAMQDERGRIAYAEEQARLNQTIALVKLLITQRFGEVSEGISSQIEDLPLADVEDLVKVFLSFNSLADLESWL QERLRS
Sequences:
>Translated_166_residues MFQEETKKYKCLEKELRLIFVELPKFKKSLSELKNLTDKWIYFLQEAASFDEIPENLGEVAEIEQALNMANFINMTPEEL EIVENRGIAMQDERGRIAYAEEQARLNQTIALVKLLITQRFGEVSEGISSQIEDLPLADVEDLVKVFLSFNSLADLESWL QERLRS >Mature_166_residues MFQEETKKYKCLEKELRLIFVELPKFKKSLSELKNLTDKWIYFLQEAASFDEIPENLGEVAEIEQALNMANFINMTPEEL EIVENRGIAMQDERGRIAYAEEQARLNQTIALVKLLITQRFGEVSEGISSQIEDLPLADVEDLVKVFLSFNSLADLESWL QERLRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19248; Mature: 19248
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQEETKKYKCLEKELRLIFVELPKFKKSLSELKNLTDKWIYFLQEAASFDEIPENLGEV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEIEQALNMANFINMTPEELEIVENRGIAMQDERGRIAYAEEQARLNQTIALVKLLITQR HHHHHHHHHHHHHCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH FGEVSEGISSQIEDLPLADVEDLVKVFLSFNSLADLESWLQERLRS HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFQEETKKYKCLEKELRLIFVELPKFKKSLSELKNLTDKWIYFLQEAASFDEIPENLGEV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEIEQALNMANFINMTPEELEIVENRGIAMQDERGRIAYAEEQARLNQTIALVKLLITQR HHHHHHHHHHHHHCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH FGEVSEGISSQIEDLPLADVEDLVKVFLSFNSLADLESWLQERLRS HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA