| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is tal [H]
Identifier: 113474384
GI number: 113474384
Start: 824434
End: 825072
Strand: Direct
Name: tal [H]
Synonym: Tery_0519
Alternate gene names: 113474384
Gene position: 824434-825072 (Clockwise)
Preceding gene: 113474383
Following gene: 113474385
Centisome position: 10.64
GC content: 39.12
Gene sequence:
>639_bases ATGGTTCTTTATCTTGACTCAGCAATAGTAACAGAAGCAAGAGTGGCAAGTAAATTTGGTTGGATATCTGGGGTGACAAC TAACCCGACTTTGCTGGCAAAAAGTGATTTGTCTCCAGAAGCAACTTTAAAGGAACTTTCAGAAATTATTTCTGGAGAAT TATATTATCAACTTACTGCTACTAGCTTTGATGAGATGATAGCGGAAGGGAAGGCTGCATCAAAATTAATTGGCCATAAA ATAGTTCTGAAAATTCCGGCAACTGCTACTGGTTTTCAAGCGACATCTCATTTGTCTAAAAATATTGACTGTTCGGTGAC CGGAATATATCATCCTGCTCAAGCATTAGTGGCTGCTGAAACAGGCGCTAAATATGCGATCGCTTATGTTAACCGGGCAA CTAGGCTTTTGGGAGATGGTTTAAAACTGGTGAGAGAGATGGCAAAAGTACTTGAAGGTAGCTCTACAGAAATTTTAGCA GCAAGTGTGAAGTCTCCTGATGAAGCTACTGAAACTTTATTGGCCGGTGCTCACCATCTAACGTTACCATTTTCTGTGTT GCAGACAATAACTACCCATGAGTTATCAGAGCAAACTTTTAAGGAGTTTAATGAAAAAGGAAGAGGAATTATGTATTAA
Upstream 100 bases:
>100_bases ATAGTCGAATATATTTGTCTCTTACTGCCCTCTGTTATAGTCAGCCCAAAGCTATATTTAACTCAAGTTTTTTAGATTAA TTTTGAATAGGAGAAAAAAA
Downstream 100 bases:
>100_bases TTGAAAATGATAAAATATCTATAGGAGAAAGCTGATATTGAGGAGAAATATATTTTTTTTAAGTTCATAAAAGGCTTGCT CCTAGATTTAAAATTTATCA
Product: transaldolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MVLYLDSAIVTEARVASKFGWISGVTTNPTLLAKSDLSPEATLKELSEIISGELYYQLTATSFDEMIAEGKAASKLIGHK IVLKIPATATGFQATSHLSKNIDCSVTGIYHPAQALVAAETGAKYAIAYVNRATRLLGDGLKLVREMAKVLEGSSTEILA ASVKSPDEATETLLAGAHHLTLPFSVLQTITTHELSEQTFKEFNEKGRGIMY
Sequences:
>Translated_212_residues MVLYLDSAIVTEARVASKFGWISGVTTNPTLLAKSDLSPEATLKELSEIISGELYYQLTATSFDEMIAEGKAASKLIGHK IVLKIPATATGFQATSHLSKNIDCSVTGIYHPAQALVAAETGAKYAIAYVNRATRLLGDGLKLVREMAKVLEGSSTEILA ASVKSPDEATETLLAGAHHLTLPFSVLQTITTHELSEQTFKEFNEKGRGIMY >Mature_212_residues MVLYLDSAIVTEARVASKFGWISGVTTNPTLLAKSDLSPEATLKELSEIISGELYYQLTATSFDEMIAEGKAASKLIGHK IVLKIPATATGFQATSHLSKNIDCSVTGIYHPAQALVAAETGAKYAIAYVNRATRLLGDGLKLVREMAKVLEGSSTEILA ASVKSPDEATETLLAGAHHLTLPFSVLQTITTHELSEQTFKEFNEKGRGIMY
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transaldolase family. Type 3B subfamily [H]
Homologues:
Organism=Escherichia coli, GI87081788, Length=214, Percent_Identity=32.2429906542056, Blast_Score=109, Evalue=1e-25, Organism=Escherichia coli, GI1790382, Length=208, Percent_Identity=38.4615384615385, Blast_Score=100, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001585 - InterPro: IPR004731 - InterPro: IPR022999 - InterPro: IPR018225 [H]
Pfam domain/function: PF00923 Transaldolase [H]
EC number: =2.2.1.2 [H]
Molecular weight: Translated: 22761; Mature: 22761
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS01054 TRANSALDOLASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLYLDSAIVTEARVASKFGWISGVTTNPTLLAKSDLSPEATLKELSEIISGELYYQLTA CEEEECHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC TSFDEMIAEGKAASKLIGHKIVLKIPATATGFQATSHLSKNIDCSVTGIYHPAQALVAAE CCHHHHHHCCHHHHHHHCCEEEEEECCCCCCCHHHHHHCCCCCEEEEECCCHHHHHHHHC TGAKYAIAYVNRATRLLGDGLKLVREMAKVLEGSSTEILAASVKSPDEATETLLAGAHHL CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCHHE TLPFSVLQTITTHELSEQTFKEFNEKGRGIMY EHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVLYLDSAIVTEARVASKFGWISGVTTNPTLLAKSDLSPEATLKELSEIISGELYYQLTA CEEEECHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC TSFDEMIAEGKAASKLIGHKIVLKIPATATGFQATSHLSKNIDCSVTGIYHPAQALVAAE CCHHHHHHCCHHHHHHHCCEEEEEECCCCCCCHHHHHHCCCCCEEEEECCCHHHHHHHHC TGAKYAIAYVNRATRLLGDGLKLVREMAKVLEGSSTEILAASVKSPDEATETLLAGAHHL CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCHHE TLPFSVLQTITTHELSEQTFKEFNEKGRGIMY EHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA