| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113474385
Identifier: 113474385
GI number: 113474385
Start: 825705
End: 825887
Strand: Direct
Name: 113474385
Synonym: Tery_0520
Alternate gene names: NA
Gene position: 825705-825887 (Clockwise)
Preceding gene: 113474384
Following gene: 113474388
Centisome position: 10.65
GC content: 35.52
Gene sequence:
>183_bases ATGAAAAATGTTGAAAAATATGTAGAATTAACTGCGGAATTAATCAATTTACCATTACAGTCAGAACATTTTCCAGGGGT AGTAGCAAATATGGAAAGAATTGCAGCGATCGCTCAATTAGTAATAGACTTTCCCCTACCACCAGAAATAGAACCTGCAC CCAAGTTTGACTTAGAAGAATAG
Upstream 100 bases:
>100_bases AAGCTAGGAGAAATTACTAGGATAAACTATCCTTACAAAAATTAAATTTCTCCCCTTAAGATAAAAAATGTTAGCTAAAA ACTAAATGAGGAAAATTAAT
Downstream 100 bases:
>100_bases GAAATAGGGGAAGGGATAATTTATTTTATTTCATAAAAATGAAGGAATAGGAAATATGGAGCAGGGAAAGAAATTATATA CTTATGAGTTGTTTTTCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 60
Protein sequence:
>60_residues MKNVEKYVELTAELINLPLQSEHFPGVVANMERIAAIAQLVIDFPLPPEIEPAPKFDLEE
Sequences:
>Translated_60_residues MKNVEKYVELTAELINLPLQSEHFPGVVANMERIAAIAQLVIDFPLPPEIEPAPKFDLEE >Mature_60_residues MKNVEKYVELTAELINLPLQSEHFPGVVANMERIAAIAQLVIDFPLPPEIEPAPKFDLEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6759; Mature: 6759
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNVEKYVELTAELINLPLQSEHFPGVVANMERIAAIAQLVIDFPLPPEIEPAPKFDLEE CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKNVEKYVELTAELINLPLQSEHFPGVVANMERIAAIAQLVIDFPLPPEIEPAPKFDLEE CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA