The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474366

Identifier: 113474366

GI number: 113474366

Start: 798757

End: 800184

Strand: Direct

Name: 113474366

Synonym: Tery_0499

Alternate gene names: NA

Gene position: 798757-800184 (Clockwise)

Preceding gene: 113474365

Following gene: 113474368

Centisome position: 10.31

GC content: 36.83

Gene sequence:

>1428_bases
ATGAATCTCGACCGAGAACTAGACGAAACAATATCAAGCTTTGCAGATATTCAAGCAGAACTTAATATCTGTAATGCGAA
AGATGCCTTAAAAGAAATCGTAATTAATTTAGACTTAACTCCGGAGGAAAGGGCAGGATTAGACTCTGAAATTTCTGGGT
TAGAGTCAATGTTAGAAAAGTTAGAAAAAGCTTCTGTTTATATTGCTGTATTTGGCATGGTAGGCCGAGGTAAGTCTTCA
CTTCTTAATGCTTTATTAGGAGAAAAAGTATTTGAAACTGGTCCAATTCATGGTGTTACTAAAACGACAAAAATTAGACA
ATGGCAATTAGGAAGAGATAATTTAACGGAAATAGAATCATCATCTACAAATTCTTTAACTTCCTACAGAATATCTCAAG
TGGAATTAATTGATACTCCTGGTATAGATGAAGTAGACGGAGAAACTAGGGAATTAATGGCCCGACAGGTGGCAAAACAG
GCAGATTTACTTTTATTTGCTGTAGCGGGAGATATTACCCAAGTAGAGTATGAAGCTCTTTCTTATTTAAGAGATGCTGG
TAAACCAATTTTACTTGTGTTTAACAAAATAGACCAGTATCCAGAAACAGATAGGTTAGCTATATATAATAAAATTCGCA
ATGAGCGAGTTCGTGAATTACTCTCACCAAATGAAATAGTTATGGCTGCTGCTTCTCCACTACTTCCTAAAGCGGTGCCA
GCTTCTGATGGTAGTCTCAGAGTAGAGATGGTGCGAGGAGAACCTCAAGTAGAAGACTTAAAGCTGAAAATATTGGAAAT
TTTAGATGGAGAAGGTAAGTCTTTGGTGGCCCTCAATAGTATGCTCTATGCTGATGATGTGAATGAACAGTTAGTACGCC
GGAAAATGGAAATTCGCTCTCAAAGTGCAGATGGGGTTATATGGAAGGGGGTGATGACAAAAGCAATGGCGATCGCTCTC
AACCCTGTGACTGTGGTAGATATTCTCAGTGGGGCGATTATTGATGTATCTATGATATTGACTTTATCAAAGTTATATGG
TATAAAAATGAATCAAAGAGGAGCATTAGACTTATTACAAAAGATAGCTATTAGTATGGGTGGTATAACTGCGAGTGAAT
TAGTGGCAAATCTAGGATTAAGTTCTGTGAAAGGATTATTGGGTTTAGCTGCACCTGTTACTAGTGGGTTATCTTTAGGG
CCCTATTTGTCTGTAGCAGCGACTCAAGCAGCAGTAGGAGGTGTATCATCTTATGGAATTGGGCAAATAACTAAAACATA
TCTTGCTAATGGTGCTTCTTGGGGAGAGGAAAGTCCGAAAACAGTAGTTAATAATATTTTGGCATCTTTGGATGAAAATT
CGATTATGGGTCGTATTAAGGAAGAATTAATAGCTAAATTAAATATCAAAAATTTTAGTAATCAATAA

Upstream 100 bases:

>100_bases
TGTAGATAGAGTAATTAAAATTCCATGTTTAGATCTGTGTTCCAGTAAAAGTAATGTTATTTATTTTCAAGCTAAAAATA
TAAGTAAGAAATACCGGAAA

Downstream 100 bases:

>100_bases
GAATAGAGACTTTTTCAGCAAATCCTAATTATAGTAAAACTTTCAAACAATAAGGCTCAAAACTCCAATTAATTAAAAGT
ATCTAGTATCATCTCTACTA

Product: small GTP-binding protein

Products: NA

Alternate protein names: GTPase SAR1 And Related Small G Proteins; Membrane Associated GTPase; GTPase SAR1 And Related Small G Protein; GTPase SAR1-Like Protein; Dynamin Family Protein

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MNLDRELDETISSFADIQAELNICNAKDALKEIVINLDLTPEERAGLDSEISGLESMLEKLEKASVYIAVFGMVGRGKSS
LLNALLGEKVFETGPIHGVTKTTKIRQWQLGRDNLTEIESSSTNSLTSYRISQVELIDTPGIDEVDGETRELMARQVAKQ
ADLLLFAVAGDITQVEYEALSYLRDAGKPILLVFNKIDQYPETDRLAIYNKIRNERVRELLSPNEIVMAAASPLLPKAVP
ASDGSLRVEMVRGEPQVEDLKLKILEILDGEGKSLVALNSMLYADDVNEQLVRRKMEIRSQSADGVIWKGVMTKAMAIAL
NPVTVVDILSGAIIDVSMILTLSKLYGIKMNQRGALDLLQKIAISMGGITASELVANLGLSSVKGLLGLAAPVTSGLSLG
PYLSVAATQAAVGGVSSYGIGQITKTYLANGASWGEESPKTVVNNILASLDENSIMGRIKEELIAKLNIKNFSNQ

Sequences:

>Translated_475_residues
MNLDRELDETISSFADIQAELNICNAKDALKEIVINLDLTPEERAGLDSEISGLESMLEKLEKASVYIAVFGMVGRGKSS
LLNALLGEKVFETGPIHGVTKTTKIRQWQLGRDNLTEIESSSTNSLTSYRISQVELIDTPGIDEVDGETRELMARQVAKQ
ADLLLFAVAGDITQVEYEALSYLRDAGKPILLVFNKIDQYPETDRLAIYNKIRNERVRELLSPNEIVMAAASPLLPKAVP
ASDGSLRVEMVRGEPQVEDLKLKILEILDGEGKSLVALNSMLYADDVNEQLVRRKMEIRSQSADGVIWKGVMTKAMAIAL
NPVTVVDILSGAIIDVSMILTLSKLYGIKMNQRGALDLLQKIAISMGGITASELVANLGLSSVKGLLGLAAPVTSGLSLG
PYLSVAATQAAVGGVSSYGIGQITKTYLANGASWGEESPKTVVNNILASLDENSIMGRIKEELIAKLNIKNFSNQ
>Mature_475_residues
MNLDRELDETISSFADIQAELNICNAKDALKEIVINLDLTPEERAGLDSEISGLESMLEKLEKASVYIAVFGMVGRGKSS
LLNALLGEKVFETGPIHGVTKTTKIRQWQLGRDNLTEIESSSTNSLTSYRISQVELIDTPGIDEVDGETRELMARQVAKQ
ADLLLFAVAGDITQVEYEALSYLRDAGKPILLVFNKIDQYPETDRLAIYNKIRNERVRELLSPNEIVMAAASPLLPKAVP
ASDGSLRVEMVRGEPQVEDLKLKILEILDGEGKSLVALNSMLYADDVNEQLVRRKMEIRSQSADGVIWKGVMTKAMAIAL
NPVTVVDILSGAIIDVSMILTLSKLYGIKMNQRGALDLLQKIAISMGGITASELVANLGLSSVKGLLGLAAPVTSGLSLG
PYLSVAATQAAVGGVSSYGIGQITKTYLANGASWGEESPKTVVNNILASLDENSIMGRIKEELIAKLNIKNFSNQ

Specific function: Unknown

COG id: COG1100

COG function: function code R; GTPase SAR1 and related small G proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51379; Mature: 51379

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLDRELDETISSFADIQAELNICNAKDALKEIVINLDLTPEERAGLDSEISGLESMLEK
CCCCHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHH
LEKASVYIAVFGMVGRGKSSLLNALLGEKVFETGPIHGVTKTTKIRQWQLGRDNLTEIES
HHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEECCCCCHHHHCC
SSTNSLTSYRISQVELIDTPGIDEVDGETRELMARQVAKQADLLLFAVAGDITQVEYEAL
CCCCCHHHEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHH
SYLRDAGKPILLVFNKIDQYPETDRLAIYNKIRNERVRELLSPNEIVMAAASPLLPKAVP
HHHHHCCCCEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC
ASDGSLRVEMVRGEPQVEDLKLKILEILDGEGKSLVALNSMLYADDVNEQLVRRKMEIRS
CCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHCCHHHHHHHHHHHHHC
QSADGVIWKGVMTKAMAIALNPVTVVDILSGAIIDVSMILTLSKLYGIKMNQRGALDLLQ
CCCCCEEHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
KIAISMGGITASELVANLGLSSVKGLLGLAAPVTSGLSLGPYLSVAATQAAVGGVSSYGI
HHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCH
GQITKTYLANGASWGEESPKTVVNNILASLDENSIMGRIKEELIAKLNIKNFSNQ
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNLDRELDETISSFADIQAELNICNAKDALKEIVINLDLTPEERAGLDSEISGLESMLEK
CCCCHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHH
LEKASVYIAVFGMVGRGKSSLLNALLGEKVFETGPIHGVTKTTKIRQWQLGRDNLTEIES
HHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEECCCCCHHHHCC
SSTNSLTSYRISQVELIDTPGIDEVDGETRELMARQVAKQADLLLFAVAGDITQVEYEAL
CCCCCHHHEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHH
SYLRDAGKPILLVFNKIDQYPETDRLAIYNKIRNERVRELLSPNEIVMAAASPLLPKAVP
HHHHHCCCCEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC
ASDGSLRVEMVRGEPQVEDLKLKILEILDGEGKSLVALNSMLYADDVNEQLVRRKMEIRS
CCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHCCHHHHHHHHHHHHHC
QSADGVIWKGVMTKAMAIALNPVTVVDILSGAIIDVSMILTLSKLYGIKMNQRGALDLLQ
CCCCCEEHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
KIAISMGGITASELVANLGLSSVKGLLGLAAPVTSGLSLGPYLSVAATQAAVGGVSSYGI
HHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCH
GQITKTYLANGASWGEESPKTVVNNILASLDENSIMGRIKEELIAKLNIKNFSNQ
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA