| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474368
Identifier: 113474368
GI number: 113474368
Start: 802278
End: 802730
Strand: Direct
Name: 113474368
Synonym: Tery_0501
Alternate gene names: NA
Gene position: 802278-802730 (Clockwise)
Preceding gene: 113474366
Following gene: 113474372
Centisome position: 10.35
GC content: 37.97
Gene sequence:
>453_bases ATGCCATTTAGTCAAGTTTTCGAGCAATGTATTTTAATTTATGCCAGTGCCACTACTGTAGAACGTTGTATTACGGATCA AATTCTTATGCATAAGTGGTTAAATCCAATGTTGCGTTGTGAACCTGTGGGTAATTGGAATACATTTGTGGGGAGTCGTA GTAGATTTATCATAAATATTCCTTTTTTACAACCCTCTTTATATAGTGTTGTAGCTGAACGAGAACCTGGTTTAATTGTT TGGGAATTTCAAGGTTTTTTCCGAGGCCGCGATCGCTGGGAATGTCGACCGGAGCCTGAAGGAACTCGTTTATTAAATCG TTTTGAGTTTGAGATACCTAATCCTATAGTAAAATTTGGTTTTAACCAGTTTGCTGCCTCGTGGACAAAAGTAGATATGG AAGCTCAACTAAGACGTTTGAAAAGGGTAGCAGAGGAGCAATACTATTTGTAA
Upstream 100 bases:
>100_bases TATTTTGCCAAGTGCCATTCATGGTTTTCTTGGGTTAATGTGAGTGTTAATTAGCAATCATTTAGATTGCTTGTATATGT CTAATAGCTTGAAGGTAACT
Downstream 100 bases:
>100_bases ATTAATTCATAATTAGGAGGTAGGCAACCTTTTTAGGGACATTGGATACAACTTCTGTACAAGTAGGGATAGATGAGAAT TATAGAGTAAGTTATTGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MPFSQVFEQCILIYASATTVERCITDQILMHKWLNPMLRCEPVGNWNTFVGSRSRFIINIPFLQPSLYSVVAEREPGLIV WEFQGFFRGRDRWECRPEPEGTRLLNRFEFEIPNPIVKFGFNQFAASWTKVDMEAQLRRLKRVAEEQYYL
Sequences:
>Translated_150_residues MPFSQVFEQCILIYASATTVERCITDQILMHKWLNPMLRCEPVGNWNTFVGSRSRFIINIPFLQPSLYSVVAEREPGLIV WEFQGFFRGRDRWECRPEPEGTRLLNRFEFEIPNPIVKFGFNQFAASWTKVDMEAQLRRLKRVAEEQYYL >Mature_149_residues PFSQVFEQCILIYASATTVERCITDQILMHKWLNPMLRCEPVGNWNTFVGSRSRFIINIPFLQPSLYSVVAEREPGLIVW EFQGFFRGRDRWECRPEPEGTRLLNRFEFEIPNPIVKFGFNQFAASWTKVDMEAQLRRLKRVAEEQYYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17831; Mature: 17700
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFSQVFEQCILIYASATTVERCITDQILMHKWLNPMLRCEPVGNWNTFVGSRSRFIINI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCCCCEEEEEC PFLQPSLYSVVAEREPGLIVWEFQGFFRGRDRWECRPEPEGTRLLNRFEFEIPNPIVKFG CCCCHHHHHHHHCCCCCEEEEEECHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHC FNQFAASWTKVDMEAQLRRLKRVAEEQYYL HHHHHHHHHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PFSQVFEQCILIYASATTVERCITDQILMHKWLNPMLRCEPVGNWNTFVGSRSRFIINI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCCCCEEEEEC PFLQPSLYSVVAEREPGLIVWEFQGFFRGRDRWECRPEPEGTRLLNRFEFEIPNPIVKFG CCCCHHHHHHHHCCCCCEEEEEECHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHC FNQFAASWTKVDMEAQLRRLKRVAEEQYYL HHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA