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The map label for this gene is rpsU [H]

Identifier: 113474365

GI number: 113474365

Start: 797861

End: 798013

Strand: Direct

Name: rpsU [H]

Synonym: Tery_0497

Alternate gene names: 113474365

Gene position: 797861-798013 (Clockwise)

Preceding gene: 113474364

Following gene: 113474366

Centisome position: 10.29

GC content: 42.48

Gene sequence:

>153_bases
ATGACCCAAGTGTTACTAGGCGAAAACGAAGGTATAGAGTCGGCCCTCCGGCGATTCAAATGTCAAGTTTCCAAGGCAGG
TATTCTTGCAGATGTTAAAAAAAACGTCGATTTTTTGAAACCCCTCAAGAAAAACGTAAGAGAAAGGCAGTAG

Upstream 100 bases:

>100_bases
GTGTTATATGATAATAATAAAAGAGTCCCTGAAGCTAAGTGCTAATAGGTAAACTATTAAAAATTAATAACTAATTTGTT
CAAGAATAGAATAAAAAGTA

Downstream 100 bases:

>100_bases
CAGCACAGCGAAAAAAACAATTTTATTAAAGTGTTAATTTATGGCTACAAAATCAGAAAATTTAGACTAGAAGCTAATGA
GGCTTGAAAAATTTTAGCCT

Product: SSU ribosomal protein S21P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 50; Mature: 49

Protein sequence:

>50_residues
MTQVLLGENEGIESALRRFKCQVSKAGILADVKKNVDFLKPLKKNVRERQ

Sequences:

>Translated_50_residues
MTQVLLGENEGIESALRRFKCQVSKAGILADVKKNVDFLKPLKKNVRERQ
>Mature_49_residues
TQVLLGENEGIESALRRFKCQVSKAGILADVKKNVDFLKPLKKNVRERQ

Specific function: Unknown

COG id: COG0828

COG function: function code J; Ribosomal protein S21

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S21P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001911
- InterPro:   IPR018278
- ProDom:   PD005521 [H]

Pfam domain/function: PF01165 Ribosomal_S21 [H]

EC number: NA

Molecular weight: Translated: 5700; Mature: 5569

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQVLLGENEGIESALRRFKCQVSKAGILADVKKNVDFLKPLKKNVRERQ
CCCEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQVLLGENEGIESALRRFKCQVSKAGILADVKKNVDFLKPLKKNVRERQ
CCEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA