The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

Click here to switch to the map view.

The map label for this gene is 113474354

Identifier: 113474354

GI number: 113474354

Start: 778406

End: 778600

Strand: Direct

Name: 113474354

Synonym: Tery_0486

Alternate gene names: NA

Gene position: 778406-778600 (Clockwise)

Preceding gene: 113474348

Following gene: 113474355

Centisome position: 10.04

GC content: 38.97

Gene sequence:

>195_bases
ATGGAACCAAACTGTGTGATTCGGAAACTTGTATCTAAAGCTCTCTATTTTCGGCGATTAACCCCTGAAATCGAAAATCA
AATCAACTCTGAGTTGACACGACTTGGCTATATTTCCGATGTAGACTATGAGGCATTAGAATTATTAATGGAAGAGATGG
ATGCAGGACGAATTCATCTCGTCCCTACTATGTAA

Upstream 100 bases:

>100_bases
TTAATGACGAATATCACTTTCTCGTATAGTATTGAATCACCTATAAGGTTAAATATGTACCAGAGAATTTAACTATATAG
AGTTTTTATTTAGATTAGCC

Downstream 100 bases:

>100_bases
GTAATTGGAATTTTTTTTATTTTTACATTTCTTCTCCTTAGCAAAACATTTTAACAGCAAAAATAATCTTTTGCATGGAT
ATCAGTTATTAGAAAATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 64; Mature: 64

Protein sequence:

>64_residues
MEPNCVIRKLVSKALYFRRLTPEIENQINSELTRLGYISDVDYEALELLMEEMDAGRIHLVPTM

Sequences:

>Translated_64_residues
MEPNCVIRKLVSKALYFRRLTPEIENQINSELTRLGYISDVDYEALELLMEEMDAGRIHLVPTM
>Mature_64_residues
MEPNCVIRKLVSKALYFRRLTPEIENQINSELTRLGYISDVDYEALELLMEEMDAGRIHLVPTM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7470; Mature: 7470

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPNCVIRKLVSKALYFRRLTPEIENQINSELTRLGYISDVDYEALELLMEEMDAGRIHL
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEE
VPTM
CCCC
>Mature Secondary Structure
MEPNCVIRKLVSKALYFRRLTPEIENQINSELTRLGYISDVDYEALELLMEEMDAGRIHL
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEE
VPTM
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA