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The map label for this gene is yjcF [C]

Identifier: 113474279

GI number: 113474279

Start: 627137

End: 627862

Strand: Direct

Name: yjcF [C]

Synonym: Tery_0401

Alternate gene names: 113474279

Gene position: 627137-627862 (Clockwise)

Preceding gene: 113474278

Following gene: 113474280

Centisome position: 8.09

GC content: 35.54

Gene sequence:

>726_bases
ATGAAACTACTAATATTGGCAATTATAATTATTGTCTCCCAAGGTGGTTGGATAAATTTAGCAAAGGCAGCCAACCCAGG
AGCTATTAGAAGACTATTAGAGACTAATGAATGTTCAGGATGCGACCTTACTCAAGCGAACCTATCTAATGCTAACTTGA
TCGGAGCTGACTTAGAAGGTGCTAACCTCCGAGGAGCAAATTTGTCTGGCGCTAACCTAGGGGTAACAATTCTTTCTAAT
GCTAATCTTTCTAATGCTAACCTTTCTAGAGCAATAATGAATGATGCAGATCTTCGAGGTGCAAATTTAACAGATGCTTA
CTTAAGTAATGCTAATTTATCCAGAGCTTATCTCACAAAAGCCAATTTAGAAAATGCTAATTTATTTGAAGCAAATTTGA
TTGAATCTCTTGCTAGTGGAGCTAATTTATCTAATGCAAATTTACGTCATTCATATTGGTTTCGAGCCAATTTAGAAAAT
GCTGATTTGAGAGAATCTGATCTTTTCAATGCTAATATGCATCAAGCAAATTTGAAGAATGCAGACTTCTCTAATGCTAA
CCTTACTACAGCCAAATTGATGGAAACAAATATAACGCTTGCTAATCTAAGTGGAGCAACTTTAGAAGGGGTTAACCTTC
GTGGTACAAGTATAGGTTCAAGTGTATGTTTAATTACCAATTATATAGGTTGTGCGCCACCAAAAGTAATTCCTGAAGTT
AAATAA

Upstream 100 bases:

>100_bases
CCACTATGCTACCGATTTTGTTATATAACTATGAGATAATAAAAATAAATATTTTTATGTTGACTAATAGTTGATAAGTG
AATTACTTCAAATACTAAAG

Downstream 100 bases:

>100_bases
AAAGTCTATAAATAGAATAAAATTTTGAGTAACCAGGTGTCGTCTCATATTCAGACAATTAATTATCAAGAAAATATTTT
TGTAGCGACGTTTTATGAAT

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MKLLILAIIIIVSQGGWINLAKAANPGAIRRLLETNECSGCDLTQANLSNANLIGADLEGANLRGANLSGANLGVTILSN
ANLSNANLSRAIMNDADLRGANLTDAYLSNANLSRAYLTKANLENANLFEANLIESLASGANLSNANLRHSYWFRANLEN
ADLRESDLFNANMHQANLKNADFSNANLTTAKLMETNITLANLSGATLEGVNLRGTSIGSSVCLITNYIGCAPPKVIPEV
K

Sequences:

>Translated_241_residues
MKLLILAIIIIVSQGGWINLAKAANPGAIRRLLETNECSGCDLTQANLSNANLIGADLEGANLRGANLSGANLGVTILSN
ANLSNANLSRAIMNDADLRGANLTDAYLSNANLSRAYLTKANLENANLFEANLIESLASGANLSNANLRHSYWFRANLEN
ADLRESDLFNANMHQANLKNADFSNANLTTAKLMETNITLANLSGATLEGVNLRGTSIGSSVCLITNYIGCAPPKVIPEV
K
>Mature_241_residues
MKLLILAIIIIVSQGGWINLAKAANPGAIRRLLETNECSGCDLTQANLSNANLIGADLEGANLRGANLSGANLGVTILSN
ANLSNANLSRAIMNDADLRGANLTDAYLSNANLSRAYLTKANLENANLFEANLIESLASGANLSNANLRHSYWFRANLEN
ADLRESDLFNANMHQANLKNADFSNANLTTAKLMETNITLANLSGATLEGVNLRGTSIGSSVCLITNYIGCAPPKVIPEV
K

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=181, Percent_Identity=34.2541436464088, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI221377802, Length=161, Percent_Identity=35.4037267080745, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 25498; Mature: 25498

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLILAIIIIVSQGGWINLAKAANPGAIRRLLETNECSGCDLTQANLSNANLIGADLEG
CHHHHEEHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCC
ANLRGANLSGANLGVTILSNANLSNANLSRAIMNDADLRGANLTDAYLSNANLSRAYLTK
CCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCHHHHHCCCCCCEEEEEE
ANLENANLFEANLIESLASGANLSNANLRHSYWFRANLENADLRESDLFNANMHQANLKN
CCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
ADFSNANLTTAKLMETNITLANLSGATLEGVNLRGTSIGSSVCLITNYIGCAPPKVIPEV
CCCCCCCCEEEEEEECCEEEEECCCCEEECCEEECCCCCCCEEEEEHHHCCCCCCCCCCC
K
C
>Mature Secondary Structure
MKLLILAIIIIVSQGGWINLAKAANPGAIRRLLETNECSGCDLTQANLSNANLIGADLEG
CHHHHEEHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCC
ANLRGANLSGANLGVTILSNANLSNANLSRAIMNDADLRGANLTDAYLSNANLSRAYLTK
CCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCHHHHHCCCCCCEEEEEE
ANLENANLFEANLIESLASGANLSNANLRHSYWFRANLENADLRESDLFNANMHQANLKN
CCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
ADFSNANLTTAKLMETNITLANLSGATLEGVNLRGTSIGSSVCLITNYIGCAPPKVIPEV
CCCCCCCCEEEEEEECCEEEEECCCCEEECCEEECCCCCCCEEEEEHHHCCCCCCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA